G1644603


Basic Information

Item Value
gene id G1644603
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 59655346 ~ 59656776 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1881340
TTTTCAATATTTTGTTCAGTAAAAATTAAGAGTAACAGTTTTATGAAACCAGTTGCACAAAATGTGTATGCGTCGACATGTCACAAAAACATTTTAGTCTTTAAAATCTTTAAAATGAAGAGAACATCACTGCTTAATAAGagtaataaaaaaaatagatgtgtgatgtgtactgtcAACAAACAAATGTAGCAAACCACATGAACATAAAAAACACCCTGGAAACCTTAGTGCTAGATAAATGGAAAACAAGTTTAAATAAATGGATGAATATAATAACATTTTGAGTTCTGTATCAGGCTACTATTCGAAGTATTTCATCTAATAGACAGAGCTCCATCATGTTGACACCCCATGCCAATCCATAATCAATACATTTGTTATGCAAAACAAATGAAGTACTGACTACTGGACTGGCTGACATGGATCTGTCAGATTCACAGATCTCCAATACACTGCAATAAGGAcggaattacagtgccttcaggaagtattcacaccccttgactttcccacGTTTAGTTGTGTAACAGATTGAATTGTAAATGGATTAAACTAAGATTTTTTTGGTAactggcctacacaaaataccccatcatgtcaaagcggaattacagtgccttcaggaagtattcacaccccttgactttcccacGTTTAGTTGTGTAACAGATTGAATTGTAAATGGATTAAACTAAGATTTTTTTGGTAactggcctacacaaaataccccatcatgtcaaagcggaattacagtgccttcaggaagtattcacaccccttgactttcccacGTTTAGTTGTGTAACAGATTGAATTGTAAATGGATTAAACTAAGATTTTCTGGGTAactggcctacacaaaataccccatcatgtcaaagcGGAATTGTGTtttcgaaatgtttacaaatcaataaaaaaaaaatgaacagctgtctcgagtcaataagtattcacccccttgttatggcaagcctaaatcattTCAGGAGGAAaactttgcttaacaagtcacataataagatgCATGGACTTACTCTggttttgaatgactacctcatctctgtaccccacgcatacaattatttgtaagatccctcagtcgagcagggaatttcaaaccacaaagaccagagaccaagggatgttttccaatgcctcgcaaagaaggacacctattggtagatggtttAAAatcaaaaagcagacattgaatatccctttcaccatggtgaagttatgaattacactttggatggtgtatcaatacacccagtcactacaaagatacagttgACGGACAGCTAGGAAActgctcaaggatttcaccataaGTTCAATggagactttaaaacagttagtttattgactgtgataggagaaaaggatggatcaataacatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1881340 True 1406 lncRNA 0.36 2 59655346 59656776

Neighbor

gene id symbol gene type direction distance location
rdh14a LOC106607934 coding upstream 166952 59482942 ~ 59488394 (+)
LOC110498210 osr1 coding upstream 427828 59220036 ~ 59227518 (+)
LOC110498208 LOC106608166 coding upstream 633027 59015463 ~ 59022319 (+)
prlh2r LOC106608506 coding upstream 751181 58895252 ~ 58904165 (+)
LOC110498202 LOC106608562 coding upstream 762605 58883806 ~ 58892741 (+)
LOC110498214 LOC106607310 coding downstream 82782 59739558 ~ 59760715 (+)
LOC110498234 LOC106607246 coding downstream 117192 59773968 ~ 59799587 (+)
ankef1b LOC106609265 coding downstream 157825 59814601 ~ 59839856 (+)
LOC110510484 LOC106607199 coding downstream 208816 59865592 ~ 59961717 (+)
LOC110498222 LOC106603387 coding downstream 339749 59996525 ~ 60022616 (+)
G1644523 NA non-coding upstream 56898 59592943 ~ 59598448 (+)
G1644524 NA non-coding upstream 57805 59586528 ~ 59597541 (+)
G1644560 NA non-coding upstream 58353 59591678 ~ 59596993 (+)
G1644518 NA non-coding upstream 60109 59542730 ~ 59595237 (+)
G1644521 NA non-coding upstream 103374 59548670 ~ 59551972 (+)
G1644610 NA non-coding downstream 8988 59665764 ~ 59666169 (+)
G1644572 NA non-coding downstream 27792 59684568 ~ 59686349 (+)
G1644635 LOC106607662 non-coding downstream 42143 59698919 ~ 59704672 (+)
G1644641 NA non-coding downstream 70852 59727628 ~ 59729262 (+)
G1644643 NA non-coding downstream 73480 59730256 ~ 59731239 (+)
G1644569 NA other upstream 45952 59608600 ~ 59609394 (+)
G1644280 NA other upstream 458333 59196684 ~ 59197013 (+)
G1644123 NA other upstream 598123 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 1357111 58293310 ~ 58298259 (+)
G1642993 LOC106611338 other upstream 1478861 58164477 ~ 58176485 (+)
G1644651 NA other downstream 91208 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 726745 60382983 ~ 60392450 (+)
plaat1l LOC106611413 other downstream 742131 60398860 ~ 60402461 (+)
chrna2a LOC103467111 other downstream 816347 60462967 ~ 60475546 (+)
LOC110498236 LOC106603790 other downstream 885260 60541955 ~ 60546243 (+)

Expression


Co-expression Network