G1644653


Basic Information

Item Value
gene id G1644653
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 59750937 ~ 59751143 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1881402
CTCCTACATTACTTTAGTCTGATGTCTCCTCTCCTACATCACTGTAGTCTGACGAGGGCTCCTCTCCTACATTACTGTAGTCTGACGAGGGCTCCTCTCTTGTATTACTGTAGTCTGACGAGGGCTCCTCTCTTGTATTACTGTAGTCTGACGAGGGCTCCTCTCTTGTATTACTGTAGTCTGACGAGGGCTCCTCCTACATTACTG

Function

NR:

description
uncharacterized protein LOC110014125

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1881402 True 207 lncRNA 0.48 1 59750937 59751143

Neighbor

gene id symbol gene type direction distance location
rdh14a LOC106607934 coding upstream 262543 59482942 ~ 59488394 (+)
LOC110498210 osr1 coding upstream 523419 59220036 ~ 59227518 (+)
LOC110498208 LOC106608166 coding upstream 728618 59015463 ~ 59022319 (+)
prlh2r LOC106608506 coding upstream 846772 58895252 ~ 58904165 (+)
LOC110498202 LOC106608562 coding upstream 858196 58883806 ~ 58892741 (+)
LOC110498234 LOC106607246 coding downstream 22825 59773968 ~ 59799587 (+)
ankef1b LOC106609265 coding downstream 63458 59814601 ~ 59839856 (+)
LOC110510484 LOC106607199 coding downstream 114449 59865592 ~ 59961717 (+)
LOC110498222 LOC106603387 coding downstream 245382 59996525 ~ 60022616 (+)
LOC110498212 rp1l1 coding downstream 560316 60311459 ~ 60330337 (+)
G1644643 NA non-coding upstream 19698 59730256 ~ 59731239 (+)
G1644641 NA non-coding upstream 21675 59727628 ~ 59729262 (+)
G1644635 LOC106607662 non-coding upstream 46265 59698919 ~ 59704672 (+)
G1644572 NA non-coding upstream 64588 59684568 ~ 59686349 (+)
G1644610 NA non-coding upstream 84768 59665764 ~ 59666169 (+)
G1644654 NA non-coding downstream 483 59751626 ~ 59751858 (+)
G1644645 NA non-coding downstream 10166 59761309 ~ 59762643 (+)
G1644921 NA non-coding downstream 62479 59813622 ~ 59813834 (+)
G1644944 NA non-coding downstream 94218 59845361 ~ 59845842 (+)
G1644954 NA non-coding downstream 99215 59850358 ~ 59850594 (+)
G1644651 NA other upstream 2592 59747984 ~ 59748345 (+)
G1644569 NA other upstream 141543 59608600 ~ 59609394 (+)
G1644280 NA other upstream 553924 59196684 ~ 59197013 (+)
G1644123 NA other upstream 693714 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 1452702 58293310 ~ 58298259 (+)
LOC110498402 LOC106604468 other downstream 632378 60382983 ~ 60392450 (+)
plaat1l LOC106611413 other downstream 647764 60398860 ~ 60402461 (+)
chrna2a LOC103467111 other downstream 721980 60462967 ~ 60475546 (+)
LOC110498236 LOC106603790 other downstream 790893 60541955 ~ 60546243 (+)
G1645443 NA other downstream 964790 60715933 ~ 60718611 (+)

Expression


Co-expression Network