G1644958


Basic Information

Item Value
gene id G1644958
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 59853628 ~ 59853860 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1881756
TAACCCTGTGTCTGCTCTATCCAGTGGTGACAGACTCATGACTTTCTCTCCTAGATAACCCTGCTCTATCCAGTGGTGACAGACTCatgactttctctctctagataaccctgctctatccagtggtgactgactcatgactttctctctctagataaccctgctctatccagtggtgactgactcatgactttctctcctagataaccctgctctatccagtggtgactgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1881756 True 233 lncRNA 0.47 1 59853628 59853860

Neighbor

gene id symbol gene type direction distance location
ankef1b LOC106609265 coding upstream 13772 59814601 ~ 59839856 (+)
LOC110498234 LOC106607246 coding upstream 54041 59773968 ~ 59799587 (+)
LOC110498214 LOC106607310 coding upstream 92913 59739558 ~ 59760715 (+)
rdh14a LOC106607934 coding upstream 365234 59482942 ~ 59488394 (+)
LOC110498210 osr1 coding upstream 626110 59220036 ~ 59227518 (+)
LOC110510484 LOC106607199 coding downstream 11732 59865592 ~ 59961717 (+)
LOC110498222 LOC106603387 coding downstream 142665 59996525 ~ 60022616 (+)
LOC110498212 rp1l1 coding downstream 457599 60311459 ~ 60330337 (+)
fndc4b LOC106604723 coding downstream 504188 60358048 ~ 60375297 (+)
LOC110498402 LOC106604468 coding downstream 529123 60382983 ~ 60392450 (+)
G1644954 NA non-coding upstream 3034 59850358 ~ 59850594 (+)
G1644944 NA non-coding upstream 7786 59845361 ~ 59845842 (+)
G1644921 NA non-coding upstream 39794 59813622 ~ 59813834 (+)
G1644645 NA non-coding upstream 90985 59761309 ~ 59762643 (+)
G1644654 NA non-coding upstream 101770 59751626 ~ 59751858 (+)
G1644960 NA non-coding downstream 1342 59855202 ~ 59855654 (+)
G1644961 NA non-coding downstream 3470 59857330 ~ 59857650 (+)
G1644968 NA non-coding downstream 10355 59864215 ~ 59864506 (+)
G1645013 NA non-coding downstream 101751 59955611 ~ 59955925 (+)
G1645016 NA non-coding downstream 104423 59958283 ~ 59959807 (+)
G1644651 NA other upstream 105283 59747984 ~ 59748345 (+)
G1644569 NA other upstream 244234 59608600 ~ 59609394 (+)
G1644280 NA other upstream 656615 59196684 ~ 59197013 (+)
G1644123 NA other upstream 796405 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 1555393 58293310 ~ 58298259 (+)
plaat1l LOC106611413 other downstream 545047 60398860 ~ 60402461 (+)
chrna2a LOC103467111 other downstream 619263 60462967 ~ 60475546 (+)
LOC110498236 LOC106603790 other downstream 688176 60541955 ~ 60546243 (+)
G1645443 NA other downstream 862073 60715933 ~ 60718611 (+)

Expression


Co-expression Network