G1645013



Basic Information


Item Value
gene id G1645013
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 59955611 ~ 59955925 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1881822
atagggtttatataggttatatataagggtatatagggtttatataggttatatataagggtatatagggtttatataggttatatataagggtatatagggtttatataggttatatataagggtatatagggtttatataggttatatataagggtatatagggtttatataggttatatataagggtatatagggtttatataggtCATATATAAGgttatatagggtttatataggttatatataagggtatatagggtttatataggttatatataag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1881822 True 283 lncRNA 0.25 2 59955611 59955925

Neighbor


gene id symbol gene type direction distance location
ankef1b LOC106609265 coding upstream 115755 59814601 ~ 59839856 (+)
LOC110498234 LOC106607246 coding upstream 156024 59773968 ~ 59799587 (+)
LOC110498214 LOC106607310 coding upstream 194896 59739558 ~ 59760715 (+)
rdh14a LOC106607934 coding upstream 467217 59482942 ~ 59488394 (+)
LOC110498210 osr1 coding upstream 728093 59220036 ~ 59227518 (+)
LOC110498222 LOC106603387 coding downstream 40600 59996525 ~ 60022616 (+)
LOC110498212 rp1l1 coding downstream 355534 60311459 ~ 60330337 (+)
fndc4b LOC106604723 coding downstream 402123 60358048 ~ 60375297 (+)
LOC110498402 LOC106604468 coding downstream 427058 60382983 ~ 60392450 (+)
plaat1l LOC106611413 coding downstream 442935 60398860 ~ 60402461 (+)
G1644968 NA non-coding upstream 91105 59864215 ~ 59864506 (+)
G1644961 NA non-coding upstream 97961 59857330 ~ 59857650 (+)
G1644960 NA non-coding upstream 99957 59855202 ~ 59855654 (+)
G1644958 NA non-coding upstream 101751 59853628 ~ 59853860 (+)
G1644954 NA non-coding upstream 105017 59850358 ~ 59850594 (+)
G1645016 NA non-coding downstream 2358 59958283 ~ 59959807 (+)
G1645034 NA non-coding downstream 46019 60001944 ~ 60003668 (+)
G1645042 NA non-coding downstream 68007 60023932 ~ 60024286 (+)
G1645044 NA non-coding downstream 69958 60025883 ~ 60026242 (+)
G1644651 NA other upstream 207266 59747984 ~ 59748345 (+)
G1644569 NA other upstream 346217 59608600 ~ 59609394 (+)
G1644280 NA other upstream 758598 59196684 ~ 59197013 (+)
G1644123 NA other upstream 898388 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 1657376 58293310 ~ 58298259 (+)
chrna2a LOC103467111 other downstream 517198 60462967 ~ 60475546 (+)
LOC110498236 LOC106603790 other downstream 586111 60541955 ~ 60546243 (+)
G1645443 NA other downstream 760008 60715933 ~ 60718611 (+)

Expression



Co-expression Network