Gene
RNA
| Item | Value |
|---|---|
| gene id | G1645016 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 59958283 ~ 59959807 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1881825 | True | 964 | lncRNA | 0.33 | 2 | 59958283 | 59959807 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ankef1b | LOC106609265 | coding | upstream | 118427 | 59814601 ~ 59839856 (+) |
| LOC110498234 | LOC106607246 | coding | upstream | 158696 | 59773968 ~ 59799587 (+) |
| LOC110498214 | LOC106607310 | coding | upstream | 197568 | 59739558 ~ 59760715 (+) |
| rdh14a | LOC106607934 | coding | upstream | 469889 | 59482942 ~ 59488394 (+) |
| LOC110498210 | osr1 | coding | upstream | 730765 | 59220036 ~ 59227518 (+) |
| LOC110498222 | LOC106603387 | coding | downstream | 36718 | 59996525 ~ 60022616 (+) |
| LOC110498212 | rp1l1 | coding | downstream | 351652 | 60311459 ~ 60330337 (+) |
| fndc4b | LOC106604723 | coding | downstream | 398241 | 60358048 ~ 60375297 (+) |
| LOC110498402 | LOC106604468 | coding | downstream | 423176 | 60382983 ~ 60392450 (+) |
| plaat1l | LOC106611413 | coding | downstream | 439053 | 60398860 ~ 60402461 (+) |
| G1645013 | NA | non-coding | upstream | 2358 | 59955611 ~ 59955925 (+) |
| G1644968 | NA | non-coding | upstream | 93777 | 59864215 ~ 59864506 (+) |
| G1644961 | NA | non-coding | upstream | 100633 | 59857330 ~ 59857650 (+) |
| G1644960 | NA | non-coding | upstream | 102629 | 59855202 ~ 59855654 (+) |
| G1644958 | NA | non-coding | upstream | 104423 | 59853628 ~ 59853860 (+) |
| G1645034 | NA | non-coding | downstream | 42137 | 60001944 ~ 60003668 (+) |
| G1645042 | NA | non-coding | downstream | 64125 | 60023932 ~ 60024286 (+) |
| G1645044 | NA | non-coding | downstream | 66076 | 60025883 ~ 60026242 (+) |
| G1645045 | NA | non-coding | downstream | 66530 | 60026337 ~ 60026829 (+) |
| G1644651 | NA | other | upstream | 209938 | 59747984 ~ 59748345 (+) |
| G1644569 | NA | other | upstream | 348889 | 59608600 ~ 59609394 (+) |
| G1644280 | NA | other | upstream | 761270 | 59196684 ~ 59197013 (+) |
| G1644123 | NA | other | upstream | 901060 | 59054523 ~ 59057223 (+) |
| LOC110498189 | klhdc1 | other | upstream | 1660048 | 58293310 ~ 58298259 (+) |
| chrna2a | LOC103467111 | other | downstream | 513316 | 60462967 ~ 60475546 (+) |
| LOC110498236 | LOC106603790 | other | downstream | 582229 | 60541955 ~ 60546243 (+) |
| G1645443 | NA | other | downstream | 756126 | 60715933 ~ 60718611 (+) |
