Gene
RNA
| Item | Value |
|---|---|
| gene id | G1645217 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 60175434 ~ 60183993 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1882073 | True | 240 | lncRNA | 0.37 | 2 | 60175434 | 60183993 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498222 | LOC106603387 | coding | upstream | 152818 | 59996525 ~ 60022616 (+) |
| LOC110510484 | LOC106607199 | coding | upstream | 213717 | 59865592 ~ 59961717 (+) |
| ankef1b | LOC106609265 | coding | upstream | 335578 | 59814601 ~ 59839856 (+) |
| LOC110498234 | LOC106607246 | coding | upstream | 375847 | 59773968 ~ 59799587 (+) |
| LOC110498214 | LOC106607310 | coding | upstream | 414719 | 59739558 ~ 59760715 (+) |
| LOC110498212 | rp1l1 | coding | downstream | 127466 | 60311459 ~ 60330337 (+) |
| fndc4b | LOC106604723 | coding | downstream | 174055 | 60358048 ~ 60375297 (+) |
| LOC110498402 | LOC106604468 | coding | downstream | 198990 | 60382983 ~ 60392450 (+) |
| plaat1l | LOC106611413 | coding | downstream | 214867 | 60398860 ~ 60402461 (+) |
| LOC118941500 | NA | coding | downstream | 218466 | 60402459 ~ 60405097 (+) |
| G1645189 | NA | non-coding | upstream | 22581 | 60123169 ~ 60152853 (+) |
| G1645180 | NA | non-coding | upstream | 52322 | 60114788 ~ 60123112 (+) |
| G1645171 | LOC106606422 | non-coding | upstream | 89414 | 60075467 ~ 60086020 (+) |
| G1645172 | NA | non-coding | upstream | 92626 | 60078165 ~ 60082808 (+) |
| G1645066 | NA | non-coding | upstream | 114370 | 60060468 ~ 60061064 (+) |
| G1645263 | NA | non-coding | downstream | 70113 | 60254106 ~ 60254945 (+) |
| G1645282 | NA | non-coding | downstream | 94622 | 60278615 ~ 60278849 (+) |
| G1645283 | cssa01h8orf74 | non-coding | downstream | 96560 | 60280553 ~ 60283213 (+) |
| G1645308 | NA | non-coding | downstream | 154173 | 60338166 ~ 60338669 (+) |
| G1644651 | NA | other | upstream | 427089 | 59747984 ~ 59748345 (+) |
| G1644569 | NA | other | upstream | 566040 | 59608600 ~ 59609394 (+) |
| G1644280 | NA | other | upstream | 978421 | 59196684 ~ 59197013 (+) |
| G1644123 | NA | other | upstream | 1118211 | 59054523 ~ 59057223 (+) |
| LOC110498189 | klhdc1 | other | upstream | 1877199 | 58293310 ~ 58298259 (+) |
| chrna2a | LOC103467111 | other | downstream | 289130 | 60462967 ~ 60475546 (+) |
| LOC110498236 | LOC106603790 | other | downstream | 358043 | 60541955 ~ 60546243 (+) |
| G1645443 | NA | other | downstream | 531940 | 60715933 ~ 60718611 (+) |
