G1645282


Basic Information

Item Value
gene id G1645282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 60278615 ~ 60278849 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1882153
GTCCATTGTTGCCAAGAAAGAGTATGATATTGTCATGCCCAAACAGACCGCTTGACGTGATTGGATAAGGTTTCTGATTCCAAATCAGAAGATTGAAAGTTTGAGTCACTTCGTGTTTTAAATCTAGTCAAAATATGATTCTTATCGCAATAACCCACTTATTGATTGTCAGAGCCAACTTTAACCAAGAATGTGTTATTCGACAAATTCTACTTTTAAACCCTCTGATTTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1882153 True 235 lncRNA 0.36 1 60278615 60278849

Neighbor

gene id symbol gene type direction distance location
LOC110498222 LOC106603387 coding upstream 255999 59996525 ~ 60022616 (+)
LOC110510484 LOC106607199 coding upstream 316898 59865592 ~ 59961717 (+)
ankef1b LOC106609265 coding upstream 438759 59814601 ~ 59839856 (+)
LOC110498234 LOC106607246 coding upstream 479028 59773968 ~ 59799587 (+)
LOC110498214 LOC106607310 coding upstream 517900 59739558 ~ 59760715 (+)
LOC110498212 rp1l1 coding downstream 32610 60311459 ~ 60330337 (+)
fndc4b LOC106604723 coding downstream 79199 60358048 ~ 60375297 (+)
LOC110498402 LOC106604468 coding downstream 104134 60382983 ~ 60392450 (+)
plaat1l LOC106611413 coding downstream 120011 60398860 ~ 60402461 (+)
LOC118941500 NA coding downstream 123610 60402459 ~ 60405097 (+)
G1645263 NA non-coding upstream 23670 60254106 ~ 60254945 (+)
G1645217 NA non-coding upstream 94622 60175434 ~ 60183993 (+)
G1645189 NA non-coding upstream 125762 60123169 ~ 60152853 (+)
G1645180 NA non-coding upstream 155503 60114788 ~ 60123112 (+)
G1645171 LOC106606422 non-coding upstream 192595 60075467 ~ 60086020 (+)
G1645283 cssa01h8orf74 non-coding downstream 1704 60280553 ~ 60283213 (+)
G1645308 NA non-coding downstream 59317 60338166 ~ 60338669 (+)
G1645311 NA non-coding downstream 75758 60354607 ~ 60355983 (+)
G1645329 LOC106604359 non-coding downstream 89315 60368164 ~ 60446671 (+)
G1644651 NA other upstream 530270 59747984 ~ 59748345 (+)
G1644569 NA other upstream 669221 59608600 ~ 59609394 (+)
G1644280 NA other upstream 1081602 59196684 ~ 59197013 (+)
G1644123 NA other upstream 1221392 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 1980380 58293310 ~ 58298259 (+)
chrna2a LOC103467111 other downstream 194274 60462967 ~ 60475546 (+)
LOC110498236 LOC106603790 other downstream 263187 60541955 ~ 60546243 (+)
G1645443 NA other downstream 437084 60715933 ~ 60718611 (+)

Expression


Co-expression Network