G1645308


Basic Information

Item Value
gene id G1645308
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 60338166 ~ 60338669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1882207
TATAGATCTGTATTGAACTGACTGAAGTCATGTGTTGTACCACTATAGATCTGTATTGAACTGACTGAAGTCATGTGATGTACCACTAGAGATCTGTATTGAACTGACTGAAGTCATGTGATGTACCACTACAGATCTGTATTGAACTGACTGAAGTCATGTGTTGTACCATGTggacagtagaggaggagggcCAGGTTATGTTGAGGACAGATGAACACAGGAGACCAATGCTGTCCTGAAAACACACGGCACAGttaacagacacacacgcacacacacacacaca

Function

NR:

description
glucokinase regulatory protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1882207 True 289 lncRNA 0.43 2 60338166 60338669

Neighbor

gene id symbol gene type direction distance location
LOC110498212 rp1l1 coding upstream 9555 60311459 ~ 60330337 (+)
LOC110498222 LOC106603387 coding upstream 315550 59996525 ~ 60022616 (+)
LOC110510484 LOC106607199 coding upstream 376449 59865592 ~ 59961717 (+)
ankef1b LOC106609265 coding upstream 498310 59814601 ~ 59839856 (+)
LOC110498234 LOC106607246 coding upstream 538579 59773968 ~ 59799587 (+)
fndc4b LOC106604723 coding downstream 19379 60358048 ~ 60375297 (+)
LOC110498402 LOC106604468 coding downstream 44314 60382983 ~ 60392450 (+)
plaat1l LOC106611413 coding downstream 60191 60398860 ~ 60402461 (+)
LOC118941500 NA coding downstream 63790 60402459 ~ 60405097 (+)
chrna2a LOC103467111 coding downstream 124298 60462967 ~ 60475546 (+)
G1645283 cssa01h8orf74 non-coding upstream 54953 60280553 ~ 60283213 (+)
G1645282 NA non-coding upstream 59317 60278615 ~ 60278849 (+)
G1645263 NA non-coding upstream 83221 60254106 ~ 60254945 (+)
G1645217 NA non-coding upstream 154173 60175434 ~ 60183993 (+)
G1645311 NA non-coding downstream 15938 60354607 ~ 60355983 (+)
G1645329 LOC106604359 non-coding downstream 29495 60368164 ~ 60446671 (+)
G1645335 NA non-coding downstream 31649 60370318 ~ 60370669 (+)
G1645344 NA non-coding downstream 60838 60399507 ~ 60399947 (+)
G1645346 NA non-coding downstream 70548 60409217 ~ 60409527 (+)
G1644651 NA other upstream 589821 59747984 ~ 59748345 (+)
G1644569 NA other upstream 728772 59608600 ~ 59609394 (+)
G1644280 NA other upstream 1141153 59196684 ~ 59197013 (+)
G1644123 NA other upstream 1280943 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 2039931 58293310 ~ 58298259 (+)
LOC110498236 LOC106603790 other downstream 203367 60541955 ~ 60546243 (+)
G1645443 NA other downstream 377264 60715933 ~ 60718611 (+)

Expression


Co-expression Network