G1645335


Basic Information

Item Value
gene id G1645335
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 60370318 ~ 60370669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1882260
gcCAAGATGatgaacatggccaagatgttcaaatgttcatagatgaccagcagggtcaaataataataatcatagtggttgtcgagggtgcaacatgtcagcacctcttgagtaaatgtcagttggcttttcatagacgatcattcagagtatctctaccgctgctgctgtctctagagagttgaaaacagcaggtctgggacaggtagcacatccggtgaacaggtcaggattcctgctgtctctagagagttgaaaacagcaggtctgggacaggtagc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1882260 True 281 lncRNA 0.46 2 60370318 60370669

Neighbor

gene id symbol gene type direction distance location
LOC110498212 rp1l1 coding upstream 41707 60311459 ~ 60330337 (+)
LOC110498222 LOC106603387 coding upstream 347702 59996525 ~ 60022616 (+)
LOC110510484 LOC106607199 coding upstream 408601 59865592 ~ 59961717 (+)
ankef1b LOC106609265 coding upstream 530462 59814601 ~ 59839856 (+)
LOC110498234 LOC106607246 coding upstream 570731 59773968 ~ 59799587 (+)
LOC110498402 LOC106604468 coding downstream 12314 60382983 ~ 60392450 (+)
plaat1l LOC106611413 coding downstream 28191 60398860 ~ 60402461 (+)
LOC118941500 NA coding downstream 31790 60402459 ~ 60405097 (+)
chrna2a LOC103467111 coding downstream 92298 60462967 ~ 60475546 (+)
LOC110498236 LOC106603790 coding downstream 171286 60541955 ~ 60546243 (+)
G1645311 NA non-coding upstream 14335 60354607 ~ 60355983 (+)
G1645308 NA non-coding upstream 31649 60338166 ~ 60338669 (+)
G1645283 cssa01h8orf74 non-coding upstream 87105 60280553 ~ 60283213 (+)
G1645282 NA non-coding upstream 91469 60278615 ~ 60278849 (+)
G1645344 NA non-coding downstream 28838 60399507 ~ 60399947 (+)
G1645346 NA non-coding downstream 38548 60409217 ~ 60409527 (+)
G1645348 NA non-coding downstream 42548 60413217 ~ 60414578 (+)
G1645352 NA non-coding downstream 59651 60430320 ~ 60430826 (+)
G1645316 LOC106603693 non-coding downstream 107299 60477968 ~ 60534329 (+)
G1644651 NA other upstream 621973 59747984 ~ 59748345 (+)
G1644569 NA other upstream 760924 59608600 ~ 59609394 (+)
G1644280 NA other upstream 1173305 59196684 ~ 59197013 (+)
G1644123 NA other upstream 1313095 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 2072083 58293310 ~ 58298259 (+)
G1645443 NA other downstream 345264 60715933 ~ 60718611 (+)

Expression


Co-expression Network