G1645344


Basic Information

Item Value
gene id G1645344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 60399507 ~ 60399947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1882269
GTAGGATACTTCATATCGTTACTATACCTGGTAGGATACTTCAGATCATTACTATACCTGGTAGGATACTTCATATCATTACTGTACCTGGTAGGACTCTTCATCGTATCATATGATTAGATGTTATACTGTTATTGTGATAGGTTTGTTCTGTGATCTGACATTCTATAGTTTTTATCATGAATGTTAGACTCTGATTCTGTAATGACTTCAGTTTAGAGGAAGTACCGATCTGTAGCACTAGCAGCTAACATTTACTAACAACACAactgtagtgggggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1882269 True 282 lncRNA 0.37 2 60399507 60399947

Neighbor

gene id symbol gene type direction distance location
LOC110498402 LOC106604468 coding upstream 7057 60382983 ~ 60392450 (+)
fndc4b LOC106604723 coding upstream 24210 60358048 ~ 60375297 (+)
LOC110498212 rp1l1 coding upstream 70896 60311459 ~ 60330337 (+)
LOC110498222 LOC106603387 coding upstream 376891 59996525 ~ 60022616 (+)
LOC110510484 LOC106607199 coding upstream 437790 59865592 ~ 59961717 (+)
LOC118941500 NA coding downstream 2512 60402459 ~ 60405097 (+)
chrna2a LOC103467111 coding downstream 63020 60462967 ~ 60475546 (+)
LOC110498236 LOC106603790 coding downstream 142008 60541955 ~ 60546243 (+)
LOC110498226 LOC106603826 coding downstream 156789 60556736 ~ 60569739 (+)
LOC100136771 pomc coding downstream 379994 60779941 ~ 60782510 (+)
G1645335 NA non-coding upstream 28838 60370318 ~ 60370669 (+)
G1645311 NA non-coding upstream 43524 60354607 ~ 60355983 (+)
G1645308 NA non-coding upstream 60838 60338166 ~ 60338669 (+)
G1645283 cssa01h8orf74 non-coding upstream 116294 60280553 ~ 60283213 (+)
G1645346 NA non-coding downstream 9270 60409217 ~ 60409527 (+)
G1645348 NA non-coding downstream 13270 60413217 ~ 60414578 (+)
G1645352 NA non-coding downstream 30373 60430320 ~ 60430826 (+)
G1645316 LOC106603693 non-coding downstream 78021 60477968 ~ 60534329 (+)
G1645371 NA non-coding downstream 100309 60500256 ~ 60503922 (+)
G1644651 NA other upstream 651162 59747984 ~ 59748345 (+)
G1644569 NA other upstream 790113 59608600 ~ 59609394 (+)
G1644280 NA other upstream 1202494 59196684 ~ 59197013 (+)
G1644123 NA other upstream 1342284 59054523 ~ 59057223 (+)
G1645443 NA other downstream 315986 60715933 ~ 60718611 (+)
G1645444 NA other downstream 318811 60718758 ~ 60738957 (+)
G1646089 NA other downstream 802411 61200860 ~ 61203352 (+)

Expression


Co-expression Network