Gene
RNA
| Item | Value |
|---|---|
| gene id | G1646090 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 61201859 ~ 61205016 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1883227 | True | 422 | lncRNA | 0.39 | 2 | 61201859 | 61205016 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| xdh | xdh | coding | upstream | 264662 | 60888364 ~ 60937197 (+) |
| LOC110498232 | LOC106605409 | coding | upstream | 334894 | 60849843 ~ 60866965 (+) |
| LOC100136771 | pomc | coding | upstream | 419349 | 60779941 ~ 60782510 (+) |
| LOC110498226 | LOC106603826 | coding | upstream | 632120 | 60556736 ~ 60569739 (+) |
| LOC110498236 | LOC106603790 | coding | upstream | 656918 | 60541955 ~ 60546243 (+) |
| LOC110498404 | LOC105025554 | coding | downstream | 37406 | 61242422 ~ 61308910 (+) |
| LOC118941508 | LOC106603467 | coding | downstream | 157416 | 61362432 ~ 61382346 (+) |
| LOC118941509 | LOC106603467 | coding | downstream | 187556 | 61392572 ~ 61401264 (+) |
| LOC118941510 | LOC106603467 | coding | downstream | 202625 | 61407641 ~ 61430060 (+) |
| LOC110498259 | LOC106603387 | coding | downstream | 495689 | 61700705 ~ 61707803 (+) |
| G1646084 | NA | non-coding | upstream | 12660 | 61188848 ~ 61189199 (+) |
| G1646047 | NA | non-coding | upstream | 81966 | 61119675 ~ 61119893 (+) |
| G1646028 | NA | non-coding | upstream | 95796 | 61105835 ~ 61106063 (+) |
| G1645557 | NA | non-coding | upstream | 155294 | 61045296 ~ 61046565 (+) |
| G1645533 | NA | non-coding | upstream | 278997 | 60919229 ~ 60922862 (+) |
| G1646100 | NA | non-coding | downstream | 20742 | 61225758 ~ 61226425 (+) |
| G1646112 | NA | non-coding | downstream | 51436 | 61256452 ~ 61256784 (+) |
| G1646126 | NA | non-coding | downstream | 92908 | 61297924 ~ 61298353 (+) |
| G1646221 | NA | non-coding | downstream | 114031 | 61319047 ~ 61320838 (+) |
| G1645444 | NA | other | upstream | 462902 | 60718758 ~ 60738957 (+) |
| G1645443 | NA | other | upstream | 483248 | 60715933 ~ 60718611 (+) |
| chrna2a | LOC103467111 | other | upstream | 726330 | 60462967 ~ 60475546 (+) |
| plaat1l | LOC106611413 | other | upstream | 799455 | 60398860 ~ 60402461 (+) |
| G1646225 | NA | other | downstream | 139771 | 61344787 ~ 61345154 (+) |
| G1646294 | NA | other | downstream | 353025 | 61558041 ~ 61561084 (+) |
| G1646509 | NA | other | downstream | 939167 | 62144183 ~ 62145290 (+) |
| srsf5a | LOC106611464 | other | downstream | 1281985 | 62486921 ~ 62493719 (+) |
