Gene
RNA
| Item | Value |
|---|---|
| gene id | G1646259 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 61438181 ~ 61440057 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| beta-crystallin S-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1883452 | False | 1116 | lncRNA | 0.41 | 5 | 61438181 | 61440057 |
| TU1883451 | True | 880 | lncRNA | 0.40 | 2 | 61439154 | 61440057 |
61,436,800
61,437,200
61,437,600
61,438,000
61,438,400
61,438,800
61,439,200
61,439,600
61,440,000
61,440,400
61,440,800
61,441,200
61,441,600
61,442,000
61,442,400
61,442,800
61,443,200
61,443,600
61,444,000
61,444,400
NC_048583.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941510 | LOC106603467 | coding | upstream | 8724 | 61407641 ~ 61430060 (+) |
| LOC118941509 | LOC106603467 | coding | upstream | 36917 | 61392572 ~ 61401264 (+) |
| LOC118941508 | LOC106603467 | coding | upstream | 55835 | 61362432 ~ 61382346 (+) |
| LOC110498404 | LOC105025554 | coding | upstream | 133050 | 61242422 ~ 61308910 (+) |
| xdh | xdh | coding | upstream | 500984 | 60888364 ~ 60937197 (+) |
| LOC110498259 | LOC106603387 | coding | downstream | 260648 | 61700705 ~ 61707803 (+) |
| trim9 | trim9 | coding | downstream | 306081 | 61746138 ~ 61852881 (+) |
| pygl | LOC106611459 | coding | downstream | 423580 | 61863637 ~ 61899051 (+) |
| LOC118941521 | NA | coding | downstream | 441273 | 61881330 ~ 61882333 (+) |
| nin | LOC106611458 | coding | downstream | 484269 | 61924326 ~ 62009301 (+) |
| G1646254 | NA | non-coding | upstream | 18636 | 61417906 ~ 61419545 (+) |
| G1646232 | NA | non-coding | upstream | 22395 | 61362456 ~ 61415786 (+) |
| G1646229 | NA | non-coding | upstream | 82825 | 61355010 ~ 61355356 (+) |
| G1646260 | NA | non-coding | downstream | 1093 | 61441150 ~ 61441369 (+) |
| G1646271 | NA | non-coding | downstream | 16383 | 61456440 ~ 61483744 (+) |
| G1646270 | NA | non-coding | downstream | 17404 | 61457461 ~ 61502008 (+) |
| G1646273 | NA | non-coding | downstream | 26063 | 61466120 ~ 61466395 (+) |
| G1646236 | NA | non-coding | downstream | 63196 | 61503253 ~ 61598488 (+) |
| G1646225 | NA | other | upstream | 93027 | 61344787 ~ 61345154 (+) |
| G1646089 | NA | other | upstream | 234829 | 61200860 ~ 61203352 (+) |
| G1645444 | NA | other | upstream | 699224 | 60718758 ~ 60738957 (+) |
| G1645443 | NA | other | upstream | 719570 | 60715933 ~ 60718611 (+) |
| G1646294 | NA | other | downstream | 117984 | 61558041 ~ 61561084 (+) |
| G1646509 | NA | other | downstream | 704126 | 62144183 ~ 62145290 (+) |
| srsf5a | LOC106611464 | other | downstream | 1046944 | 62486921 ~ 62493719 (+) |
| G1647342 | NA | other | downstream | 1576898 | 63016955 ~ 63018688 (+) |
| G1647411 | NA | other | downstream | 1635092 | 63075149 ~ 63077143 (+) |
