Gene
RNA
| Item | Value |
|---|---|
| gene id | G1646388 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 61883386 ~ 61884027 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1883687 | True | 446 | lncRNA | 0.50 | 2 | 61883386 | 61884027 |
61,880,400
61,880,800
61,881,200
61,881,600
61,882,000
61,882,400
61,882,800
61,883,200
61,883,600
61,884,000
61,884,400
61,884,800
61,885,200
61,885,600
NC_048583.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941521 | NA | coding | upstream | 1053 | 61881330 ~ 61882333 (+) |
| trim9 | trim9 | coding | upstream | 30505 | 61746138 ~ 61852881 (+) |
| LOC110498259 | LOC106603387 | coding | upstream | 177243 | 61700705 ~ 61707803 (+) |
| LOC118941510 | LOC106603467 | coding | upstream | 453929 | 61407641 ~ 61430060 (+) |
| LOC118941509 | LOC106603467 | coding | upstream | 482122 | 61392572 ~ 61401264 (+) |
| nin | LOC106611458 | coding | downstream | 40299 | 61924326 ~ 62009301 (+) |
| sav1 | sav1 | coding | downstream | 136567 | 62020594 ~ 62038893 (+) |
| map4k5 | LOC106611444 | coding | downstream | 211414 | 62095441 ~ 62210453 (+) |
| cdkl1 | cdkl1 | coding | downstream | 333076 | 62217103 ~ 62244281 (+) |
| l2hgdh | l2hgdh | coding | downstream | 364700 | 62248727 ~ 62273364 (+) |
| G1646381 | NA | non-coding | upstream | 42064 | 61839917 ~ 61841322 (+) |
| G1646379 | NA | non-coding | upstream | 47473 | 61829990 ~ 61835913 (+) |
| G1646361 | NA | non-coding | upstream | 87322 | 61795814 ~ 61796064 (+) |
| G1646345 | NA | non-coding | upstream | 123111 | 61755875 ~ 61760275 (+) |
| G1646335 | NA | non-coding | upstream | 138384 | 61742083 ~ 61745002 (+) |
| G1646390 | NA | non-coding | downstream | 9920 | 61893947 ~ 61894367 (+) |
| pygl | LOC106611459 | non-coding | downstream | 14270 | 61863637 ~ 61899051 (+) |
| G1646394 | LOC106603106 | non-coding | downstream | 30634 | 61914661 ~ 61915497 (+) |
| G1646412 | NA | non-coding | downstream | 78624 | 61962651 ~ 62023734 (+) |
| G1646294 | NA | other | upstream | 322302 | 61558041 ~ 61561084 (+) |
| G1646225 | NA | other | upstream | 538232 | 61344787 ~ 61345154 (+) |
| LOC110498404 | LOC105025554 | other | upstream | 591545 | 61242422 ~ 61308910 (+) |
| G1646089 | NA | other | upstream | 680034 | 61200860 ~ 61203352 (+) |
| G1645444 | NA | other | upstream | 1144429 | 60718758 ~ 60738957 (+) |
| G1646509 | NA | other | downstream | 260156 | 62144183 ~ 62145290 (+) |
| srsf5a | LOC106611464 | other | downstream | 602974 | 62486921 ~ 62493719 (+) |
| G1647342 | NA | other | downstream | 1132928 | 63016955 ~ 63018688 (+) |
| G1647411 | NA | other | downstream | 1191122 | 63075149 ~ 63077143 (+) |
| G1647477 | NA | other | downstream | 1318729 | 63202756 ~ 63204057 (+) |
