Gene
RNA
| Item | Value |
|---|---|
| gene id | G1647335 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 62912566 ~ 62912993 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1884889 | True | 357 | lncRNA | 0.46 | 2 | 62912566 | 62912993 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512290 | LOC106600942 | coding | upstream | 140610 | 62655733 ~ 62771956 (+) |
| LOC110504278 | LOC102780996 | coding | upstream | 274440 | 62604904 ~ 62638126 (+) |
| LOC110504279 | LOC106599953 | coding | upstream | 309792 | 62500076 ~ 62602774 (+) |
| srsf5a | LOC106611464 | coding | upstream | 418928 | 62486921 ~ 62493719 (+) |
| LOC110504280 | LOC106602928 | coding | upstream | 427119 | 62466254 ~ 62485447 (+) |
| map3k9 | map3k9 | coding | downstream | 137824 | 63050817 ~ 63103044 (+) |
| med6 | med6 | coding | downstream | 228430 | 63141423 ~ 63152629 (+) |
| pcnx1 | pcnx1 | coding | downstream | 240360 | 63153353 ~ 63232158 (+) |
| LOC110498282 | NA | coding | downstream | 335629 | 63248622 ~ 63287372 (+) |
| LOC110498284 | chp1 | coding | downstream | 379576 | 63292569 ~ 63309243 (+) |
| G1647330 | NA | non-coding | upstream | 4249 | 62907012 ~ 62908317 (+) |
| G1647325 | NA | non-coding | upstream | 15284 | 62897063 ~ 62897282 (+) |
| G1647323 | NA | non-coding | upstream | 19985 | 62890057 ~ 62892581 (+) |
| G1647322 | NA | non-coding | upstream | 23084 | 62889279 ~ 62889482 (+) |
| G1647320 | NA | non-coding | upstream | 27232 | 62884931 ~ 62885334 (+) |
| G1647349 | NA | non-coding | downstream | 17580 | 62930573 ~ 62931003 (+) |
| LOC100136022 | NA | non-coding | downstream | 127813 | 62885583 ~ 63042917 (+) |
| G1647397 | NA | non-coding | downstream | 135233 | 63048226 ~ 63048719 (+) |
| G1647411 | NA | non-coding | downstream | 162156 | 63075149 ~ 63077143 (+) |
| G1647437 | NA | non-coding | downstream | 202086 | 63115079 ~ 63115647 (+) |
| G1646509 | NA | other | upstream | 767276 | 62144183 ~ 62145290 (+) |
| G1646294 | NA | other | upstream | 1351482 | 61558041 ~ 61561084 (+) |
| G1646225 | NA | other | upstream | 1567412 | 61344787 ~ 61345154 (+) |
| LOC110498404 | LOC105025554 | other | upstream | 1620725 | 61242422 ~ 61308910 (+) |
| G1647342 | NA | other | downstream | 103962 | 63016955 ~ 63018688 (+) |
| G1647477 | NA | other | downstream | 289763 | 63202756 ~ 63204057 (+) |
| LOC110498409 | LOC106592792 | other | downstream | 478632 | 63380908 ~ 63414582 (+) |
| G1648296 | NA | other | downstream | 1215215 | 64128208 ~ 64129068 (+) |
