LOC110498715


Basic Information

Item Value
gene id LOC110498715
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 497928 ~ 515129 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110498715
atgatggtgatgatgatgaagacgGTGGTACCTGATTGCCAGAAATGTGTGAGCCCAACAGGAgacaagaaagcaaagCTTCCCTGGAGGGTTAACGCGCTGCCTCCGGCCCTCCTGCCCTACCTGGAGCAGTTCAAGTGGGTCACCCTGTGGCTGGGAGGCGACATGCGCTCCTGGGAGGCCTCCAAGATCTTCTCCAGGAAGCTGGGCCTGAAGCGCTGCTCACTGGtgcacccgggaggccctggccGAGGGCAGGAACCTGACCTGCATCATCAAAGCCTTCATCCCCGCCACCCAAAAGTCCATTGTGTCGTTCAGGCAGCTCAGGGAGGATGTCTTTGGGGAGCTGGCTAACACAGAGCAGGTGGGAACCACGGGCAGCGTCAAGACCACCTTTATCAGTGAGTTTGCCCTGGACCCGTGCATGCAGGGTGTCAACCCGCTGTGGGGCACCTTTGAGATCAACAACGTGCGCCTGGCCTAGATCATGCTGACCCAGTTTGCCGTGCATAGGCTGGAGGGGAACCTGGACCAGTATGACTCGTGGGCTGACAGGGTTGAGGACCTACCCCTCTACTTTATGACCTTCCATGGGCAGCAGAACATCAAgtcTGTGCTGGACACCATGCAACACGCTGTCTACCGCTATGTCATCAGTCACGTGATCATTGACAACCTCATGATGGGCCATCCGGGAAGACATTATCGGAGCTTTCAGGAAGTTTGCCACCAACAGCAGCTGTAACGTCACTCTGATCCTCCAACCCAGGAAGGAGGAGGACAACAGAGAACTAGACTGCAACCATCTTAGGAACAGCCAAAGTGAGTCTGGGCATCTTCCCCCTCGGGAGacggaaaagatttggcatgggtcctcagatcctcaaaaggttctag

Function

NR:

description
twinkle protein, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110498715 True 900 mRNA 0.56 5 497928 515129
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118942481 zgc:158463 coding upstream 116612 374708 ~ 381316 (+)
LOC118942459 NA coding upstream 126965 370810 ~ 370963 (+)
LOC118942430 NA coding upstream 132013 365797 ~ 365915 (+)
LOC118942453 NA coding upstream 132392 365418 ~ 365536 (+)
LOC110498790 LOC106578304 coding downstream 20358 535487 ~ 574538 (+)
LOC110498791 brsk1 coding downstream 98047 613176 ~ 643697 (+)
LOC110498792 LOC106578302 coding downstream 147564 662693 ~ 712981 (+)
LOC110498798 vatl coding downstream 556529 1071658 ~ 1094268 (+)
LOC118942081 NA coding downstream 1264314 1779443 ~ 1786132 (+)
G1650780 NA non-coding upstream 96264 399588 ~ 401664 (+)
G1650775 NA non-coding upstream 106563 391161 ~ 391365 (+)
G1650774 NA non-coding upstream 107309 386785 ~ 390619 (+)
G1650773 NA non-coding upstream 107622 385853 ~ 390306 (+)
G1650772 NA non-coding upstream 108683 385257 ~ 389245 (+)
G1650902 NA non-coding downstream 89192 604321 ~ 604796 (+)
G1650952 NA non-coding downstream 177558 692687 ~ 693115 (+)
G1650953 NA non-coding downstream 178251 693380 ~ 693582 (+)
G1650957 NA non-coding downstream 189494 704623 ~ 704983 (+)
G1652131 NA other downstream 1133793 1648922 ~ 1649135 (+)
G1652237 NA other downstream 1228794 1743923 ~ 1744380 (+)
G1654400 NA other downstream 3381974 3897103 ~ 3897390 (+)
G1654426 NA other downstream 3434308 3949437 ~ 3955465 (+)

Expression

LOC110498715 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.2.
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LOC110498715 Expression in each Bioproject

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LOC110498715 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 0.8.
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Co-expression Network