Item | Value |
---|---|
gene id | LOC110498864 |
gene name | LOC106589517 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048584.1 |
NCBI id | CM023238.2 |
chromosome length | 46616863 |
location | 6568700 ~ 6582912 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: ER lumen protein-retaining receptor 2-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036955656.1 | False | 3615 | mRNA | 0.47 | 6 | 6571334 | 6578859 |
XM_021575535.2 | False | 4147 | mRNA | 0.46 | 7 | 6571334 | 6582911 |
XM_036955655.1 | False | 4130 | mRNA | 0.46 | 7 | 6571334 | 6582912 |
TU1897524 | True | 1460 | TUCP | 0.41 | 2 | 6568700 | 6571455 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110498863 | LOC106589519 | coding | downstream | 28842 | 6536771 ~ 6542492 (-) |
LOC110498862 | LOC106589520 | coding | downstream | 36527 | 6524480 ~ 6534807 (-) |
LOC110498729 | rhot2 | coding | downstream | 89136 | 6462415 ~ 6482198 (-) |
LOC110498859 | LOC106578257 | coding | downstream | 125292 | 6379672 ~ 6446042 (-) |
LOC110498858 | wdr24 | coding | downstream | 196905 | 6363906 ~ 6374429 (-) |
LOC110498871 | LOC106589511 | coding | upstream | 242849 | 6825761 ~ 6829305 (-) |
abcc3 | LOC106589510 | coding | upstream | 253767 | 6836679 ~ 6893619 (-) |
LOC110498873 | LOC106589507 | coding | upstream | 375750 | 6958662 ~ 6998949 (-) |
si:dkey-94l16.4 | LOC106589503 | coding | upstream | 515455 | 7079950 ~ 7110376 (-) |
mprip | LOC106589502 | coding | upstream | 529580 | 7112492 ~ 7183350 (-) |
G1657900 | NA | non-coding | downstream | 6392 | 6563753 ~ 6564942 (-) |
G1657899 | NA | non-coding | downstream | 7975 | 6562273 ~ 6563359 (-) |
G1657896 | NA | non-coding | downstream | 14268 | 6556810 ~ 6557066 (-) |
G1657870 | NA | non-coding | downstream | 52762 | 6517820 ~ 6518572 (-) |
G1657868 | LOC106589521 | non-coding | downstream | 63405 | 6505621 ~ 6507929 (-) |
G1657907 | NA | non-coding | upstream | 995 | 6583907 ~ 6584411 (-) |
G1657911 | LOC106599233 | non-coding | upstream | 5286 | 6588198 ~ 6588438 (-) |
G1657913 | NA | non-coding | upstream | 7522 | 6590434 ~ 6590689 (-) |
G1657984 | NA | non-coding | upstream | 122711 | 6705623 ~ 6706393 (-) |
G1657980 | NA | non-coding | upstream | 124245 | 6707157 ~ 6709044 (-) |
G1657869 | LOC106589521 | other | downstream | 61754 | 6509119 ~ 6509580 (-) |
G1657862 | NA | other | downstream | 71126 | 6499834 ~ 6500208 (-) |
G1657768 | NA | other | downstream | 191827 | 6377342 ~ 6379507 (-) |
LOC110498857 | LOC101479821 | other | downstream | 226753 | 6335525 ~ 6344649 (-) |
LOC110498913 | h3f3b | other | upstream | 1804056 | 8386968 ~ 8389308 (-) |
G1661023 | NA | other | upstream | 2816205 | 9399117 ~ 9400947 (-) |
G1661001 | LOC106589450 | other | upstream | 2839871 | 9422783 ~ 9460115 (-) |
G1662039 | NA | other | upstream | 3894051 | 10476963 ~ 10477185 (-) |
LOC110498953 | NA | other | upstream | 4539001 | 11121913 ~ 11158776 (-) |