Gene
RNA
| Item | Value |
|---|---|
| gene id | abcc3 |
| gene name | LOC106589510 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 6836679 ~ 6893619 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: canalicular multispecific organic anion transporter 2-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036955669.1 | False | 5265 | mRNA | 0.51 | 30 | 6836679 | 6893531 |
| XM_036955670.1 | False | 5196 | mRNA | 0.51 | 31 | 6836679 | 6893531 |
| XM_036955671.1 | False | 5193 | mRNA | 0.51 | 31 | 6836679 | 6893531 |
| XM_036955668.1 | False | 5356 | mRNA | 0.51 | 30 | 6836679 | 6893619 |
| XR_005037916.1 | False | 3818 | mRNA | 0.53 | 26 | 6840863 | 6893531 |
| XM_036955672.1 | False | 7445 | mRNA | 0.47 | 24 | 6842079 | 6893531 |
| XM_036955674.1 | False | 5056 | mRNA | 0.50 | 23 | 6842079 | 6893531 |
| XM_036955673.1 | True | 3800 | mRNA | 0.53 | 24 | 6846073 | 6893531 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498871 | LOC106589511 | coding | downstream | 7374 | 6825761 ~ 6829305 (-) |
| LOC110498864 | LOC106589517 | coding | downstream | 253767 | 6568700 ~ 6582912 (-) |
| LOC110498863 | LOC106589519 | coding | downstream | 294187 | 6536771 ~ 6542492 (-) |
| LOC110498862 | LOC106589520 | coding | downstream | 301872 | 6524480 ~ 6534807 (-) |
| LOC110498729 | rhot2 | coding | downstream | 354481 | 6462415 ~ 6482198 (-) |
| LOC110498873 | LOC106589507 | coding | upstream | 65043 | 6958662 ~ 6998949 (-) |
| si:dkey-94l16.4 | LOC106589503 | coding | upstream | 204748 | 7079950 ~ 7110376 (-) |
| mprip | LOC106589502 | coding | upstream | 218873 | 7112492 ~ 7183350 (-) |
| LOC110498884 | LOC106589498 | coding | upstream | 372724 | 7266343 ~ 7276641 (-) |
| gas7b | LOC106589492 | coding | upstream | 688299 | 7581918 ~ 7638533 (-) |
| G1658047 | NA | non-coding | downstream | 38235 | 6798148 ~ 6798444 (-) |
| G1658039 | NA | non-coding | downstream | 48369 | 6787824 ~ 6788310 (-) |
| G1658031 | NA | non-coding | downstream | 75442 | 6760962 ~ 6761237 (-) |
| G1658022 | NA | non-coding | downstream | 90513 | 6745954 ~ 6746166 (-) |
| G1658021 | NA | non-coding | downstream | 91047 | 6745433 ~ 6745632 (-) |
| G1658117 | NA | non-coding | upstream | 43703 | 6937322 ~ 6955793 (-) |
| G1658133 | NA | non-coding | upstream | 86137 | 6979756 ~ 6980181 (-) |
| G1658142 | NA | non-coding | upstream | 101949 | 6995568 ~ 6996004 (-) |
| G1658159 | NA | non-coding | upstream | 134703 | 7028322 ~ 7029490 (-) |
| G1658181 | NA | non-coding | upstream | 154288 | 7047907 ~ 7117820 (-) |
| G1657869 | LOC106589521 | other | downstream | 327099 | 6509119 ~ 6509580 (-) |
| G1657868 | LOC106589521 | other | downstream | 328750 | 6505621 ~ 6507929 (-) |
| G1657862 | NA | other | downstream | 336471 | 6499834 ~ 6500208 (-) |
| G1657768 | NA | other | downstream | 457172 | 6377342 ~ 6379507 (-) |
| LOC110498913 | h3f3b | other | upstream | 1493349 | 8386968 ~ 8389308 (-) |
| G1661023 | NA | other | upstream | 2505498 | 9399117 ~ 9400947 (-) |
| G1661001 | LOC106589450 | other | upstream | 2529164 | 9422783 ~ 9460115 (-) |
| G1662039 | NA | other | upstream | 3583344 | 10476963 ~ 10477185 (-) |
| LOC110498953 | NA | other | upstream | 4228294 | 11121913 ~ 11158776 (-) |
