dhrs7cb (dhrs7c)


Basic Information

Item Value
gene id dhrs7cb
gene name dhrs7c
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 7190807 ~ 7194759 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575560.2
TCCGCCACATGCTATTATAAGCAACCCGCTCCCACACCTAAGCAGTGGGTCCGGCAGAAACACAGAGGGGGAGTTGTGTGAATGGACGGCGGGATAGAGGCATAGAGAGGGCGAGAGAAGGGATACTTCTCGGTTATCTAACTGAACCTGGAGAACAACAGAAGATTAGCTCCTTACGCACGCTaaGATGGCGCTCCCCACTGTgatggtgctgcccatgctgaTCGTGGTGGCTGCTGGGATCTACTACATCTACAACGAGATCATCCAGTACATGTCCAAGTCCATGGTCAAGAACAAAGTGGTGGTCATCACTGATGCTGTGTCCGGAGTGGGAAGTGagtGTGCTCATCACTTCCATAAGGGTGGTGCCAGGCTGATTCTGTGTGGGGCCAGCTGGGACAAGATGGAGTCTCTGTACGACACATTGACCAGCGGGGCTGACCCCAGAGTGaCGTTCCCTCCCAAGCTGGTGCTGCTGGACTTCAGTGACATGGACAGTATGCCTGAGGTGGTGAATGAGGTGGTGGAGTGCTACGGCTGTGTGGACATCCTGGTGTGTAACAGCAGCATGAAGCTGAAGGCCCCCGTACATACTGTCTCACTGGAGCTGGACAGGAACATCATGGACATCAACTACTTTGGACCCAGCACCTTGGCCAAAGGTGTCCTTCCAGCTATGATGTCTAGGAGGTCTGGTCACATTCTATTGGTCAACAGCATCCAGGGCAGACTGGCTATCCCCTTCAGAACCTCCTACTCGGCCTCAAAGCATGCGGTGCAAGCGTTCTTTGACTCCCTGCGAGCGGAGGTGGAGGAGTATGGGATAATAGTAAGCACTATCAGCCACACCTTCATCAACGCAGCTTTACCCTCCACCCCTCCGGCTAAACCTCAGGGCCTGTCTACATTTGGCGTGCGCCCGGCCGATCTGGCCAATGAGATAATGCGAACGGTGAGCAGGAAGAAGAAAGAGGTTTTGCTGGCCCACCCCATCCCCTGGGTCGCTCTCTACCTCCGctccttctttccctctttcttctTTGCCGTGGTTGCTGCTGGAGTGAAGGACTCTGCCATGGCAGAACAGATGCAGTagaaggaagggaagagagaataAGAAAATTAAAGAAGGACAATAGAATGTATAGTGTATTATGGCATAATGCAATGAAATCTAACCCATCGGGGCAATTTAGAAGCCTTTGCCACATGGACATGGCCTCTGATGTTATTGCAGTTTGCATTGGGTCCTGTAGATGGCAGCAGATCACTGTTGTATTCTTATGTCATGTCTGTGCAGAAAAGATGCCAAAGTTGCACCACCCACTACTATCAAAATTAACTTTTGCTCTAACTTTAAACATTGCTTCTATTGGATATTTCAATGTTTAGCCTAACCATAATTAGAATATATGACCTCATatgttgttttgtgggtgatcgTTAATGTTGTCTTTTCATTTGACCAATACACTTGTCCATGTGAATTACA

Function

symbol description
dhrs7c Predicted to enable NAD-retinol dehydrogenase activity. Predicted to be involved in regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum. Predicted to be located in extracellular region and longitudinal sarcoplasmic reticulum. Predicted to be active in sarcoplasmic reticulum membrane.

NR:

description
unnamed protein product

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K11167 DHRS7C; dehydrogenase/reductase SDR family member 7C

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575560.2 True 1495 mRNA 0.50 7 7190807 7194759

Neighbor

gene id symbol gene type direction distance location
bsk146 LOC106589506 coding upstream 97267 7075481 ~ 7093540 (+)
wu:fj29h11 LOC106589505 coding upstream 116475 7015665 ~ 7074332 (+)
LOC110498876 st2b1 coding upstream 175373 7009744 ~ 7015434 (+)
LOC110498870 LOC106589512 coding upstream 409192 6777999 ~ 6781615 (+)
spag9b LOC106589513 coding upstream 482720 6657142 ~ 6709243 (+)
LOC110498883 LOC106589500 coding downstream 7117 7201876 ~ 7212181 (+)
hs3st3l LOC106589499 coding downstream 47622 7242381 ~ 7255769 (+)
LOC110498885 glp2r coding downstream 294609 7489368 ~ 7506485 (+)
pts pts coding downstream 330763 7525522 ~ 7528685 (+)
LOC110498886 LOC106589493 coding downstream 340273 7535032 ~ 7579012 (+)
G1657389 LOC106589502 non-coding upstream 74765 7114911 ~ 7116042 (+)
G1657368 LOC105030512 non-coding upstream 187251 7003229 ~ 7003556 (+)
G1657366 NA non-coding upstream 188833 7001689 ~ 7001974 (+)
G1657363 NA non-coding upstream 191966 6998363 ~ 6998841 (+)
G1657361 NA non-coding upstream 194742 6995622 ~ 6996065 (+)
G1657423 NA non-coding downstream 62378 7257137 ~ 7261264 (+)
G1657479 LOC106589498 non-coding downstream 71500 7266259 ~ 7267044 (+)
G1657582 NA non-coding downstream 207326 7402085 ~ 7402359 (+)
G1657605 NA non-coding downstream 236282 7431041 ~ 7431260 (+)
G1657606 NA non-coding downstream 236786 7431545 ~ 7431783 (+)
G1656720 NA other upstream 1197057 5990474 ~ 5993750 (+)
G1655848 NA other upstream 1960879 5227552 ~ 5229928 (+)
G1654426 NA other upstream 3235342 3949437 ~ 3955465 (+)
G1654400 NA other upstream 3293417 3897103 ~ 3897390 (+)
G1658572 NA other downstream 509747 7704506 ~ 7705151 (+)
unk LOC106589472 other downstream 1198912 8392044 ~ 8401533 (+)
LOC110498922 cssa28h17orf62 other downstream 1329533 8524125 ~ 8527761 (+)
G1661477 NA other downstream 2856863 10051622 ~ 10052089 (+)
G1662037 NA other downstream 3281408 10476167 ~ 10476689 (+)

Expression


Co-expression Network