hs3st3l (LOC106589499)


Basic Information

Item Value
gene id hs3st3l
gene name LOC106589499
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 7242381 ~ 7255769 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576715.2
agagagaaagagagagcgagaccccATGACACGCAGTCCCTGGAGACCCATGGAGTGAGACAGCGGGTAATCCCAGGGTAAAGGACCACTCCAGCCCTGCGCGGTTGATATTAACAGCTGTAGGCTATATTCTCCATGACGGTGAGGTCGAATGAGTGGGTGAATGTCTGGACAGAACACAGGAATTGATCTCTTGATTGGGTGGCTGAGCTGCGTTTGGGACTCCGGAGAAACGGGGTCACGTTGAGAATAGCAGCCAACTCAATGGATTTCATACGCGCAGAATGAACCGCCAAAAGGGAAAGATGGGACACGGGCACGCCGGCGACTTTATTGGGGTTTTGTGGAATCGACGCAGCGGCACTATGGATAATTTATTCTATCTGAGCGGCTCAGAAAGCCTTCGTGTCTTCACAGAGATTAAGTTATGTGAGCTGAGTTTACAGTAGAATGGCCCTCCTCGGATGGGACTCTGAGGGAAGGCGATGGCAACTTTTCACCACAGCAACCCAACGGATAGAGACATCAGGAGAGTCCTCCAAAAACTTATAATCATTCTATCTTTGGGAatcatctgtgtctctctcttctacTTCTTCACGGGATGCTGCGAGTCGGACCTAACGGAAAACTCAGTATCGGACAGACCCGCCAGCGATGACAGAAACCTGACGTTCTATAACAACGTTGTAACGGTACAGGATGAAGATGGATACCCAGGGACCGGGGAGGGGAGCACACTGACGCCTGGTTTGGAGACTGATAACACGGGTAAAGATTGGAAGGCGACCCGGCGGTTACCCCAAGCCCTTATTATAGGAGTGAAGAAGGGTGGCACGAGGGCTTTGCTGGAGTTTCTCAGGCTGCACCCGGACATCCGCGCGCTGGGCTCTGAGCCGCACTTCTTTGACCGGCATTACGCACGAGGCTTGCACTGGTACAGgaGTATGATGCCCAAGGCCTTGGACGGCCAGGTTGTCATGGAGAAGACACCGCGTTACTTTGTTACCGTGGAGACCCCGGGGCGTGTACACTCCATGTCGCGTGACGTGAAGCTGATTGTGGTGGTCCGAGACCCTGTGACCCGGGCCATCTCTGACTACACCCAGATCATCTCCAAGACCCCCCACATCCCTGCCTTCGAGACCCTCGCCTTCAAGAACCGCACCAATGGTGAGATTGACTCTTTATGGAGCCCTCTGTGGATCGGACTGTACGCCCAACACCTGGAGCGCTGGCTGGCCTGGTTCCCCCGGGCCCAGATCCACCTGGTCAGTGGGGAGGGCCTCATCTCCGACCCGGCAGGAGAACTAGGAAAGGTCCAGGACTTCCTGGGCCTCCAGAGGATTGTGACGGACAAGCACTTCTACTTCAATAAGACTAAAGGTTTCCCCTGCCTGAAGAAGCCAGAGGGAAGCAGCAAGCCCCACTGCCTGGGGAAGACTAAAGGCCGAACACACGCCCCCATCGACCCTGAAGTGATCCGGAGACTGAGGGAGTTCTACAGGCCGCACAACCAGCGGTTCTATCAGATGGCTGGCCAGGACTTTGGATGGCAATGAGGACTCAGCAGAGTTAACAAGGTGAAACATGAATCCATAGCAACAAAGACACAGAGGGGTGTTTGTCCGTCGGCTTCAGTTTGCACTCTGTACCTGTTACTGTGACTTGGGGCAAAGAGTAATGAAATAACCTCATACTGTTGACACAGAAGTGGCTCTGTGCTAGGAACTAAATCCAATGTTGATAGACCTCTGGGTAGCGAGGGAAACAAATATCAGACATTCCATATTGGTGACAGTGCTGAAAGACCATCTCTATGCTAGTTCCCTTTCAGCATTTAATAGATGTTCAACAAAAAAGAAAGTGGCACTTGAAGCTGGAATctttagttgctacatccatttttggagttataaatgaatgatatacacCCATTGAGTCTTGAAGAATAAaacatgcctcatgagcttagttcaactgtcatgtcctatcagaaccccaaatacaagcttgttttactccaacgtTTGTAAactatgtaaatgtaaacaaacacagcatagcctcaaaacatggttaaaactataatttgcgTACAAAGGCAAAACGCAGtaagtacatacatacatatttgAGTTAAGGCTGAAATCAGGCTTTGTAGTATCTGTTTGATACTGTGTCCTGGTTCAATTATGTTCCATTTTAAGATAAACTAGGAGGGAGAAATTTGCAGTAACTGCAAAATCCAAGTCAAAAGCCAGGAAAACAGAATTGACTGCACTTTGGCTTTGATCCACTATATTTTGACTGCAGTTACCTGCTCTGCCATACAAAGGCAAAGAGCAGTAACTATGCAAACAGTGAAACTGAGAAAAATGGCTTTAAAGTTTATTTGCTGTCCAGCCAAATATGTTGTAGGTAGGCAAGTGATAATGCCAGTGATAATGCCAGTGATAATGCATGATCTTGTTACGAAGTCATTTTTTAATGCATTACAACCATGACCACTGATTTGTGACCCCGAAGTCAAATAAATGACCATACAAAGTCAAACAGAAAAACAATGAGTTGGATAAACATATTCATGTTGTATATACCGCACAAAGTCAAAAATGTTTTTGGAAGTATCACCATTCTGCGAGTGGAAATAGCCCTAACCTTAATAAGGGTTATCACAATAGAATGTACAAAACATGCAAGCATAACTACAttacaccattaaatacagttgggatgTAGTTAGAACTCAATCTCAAACTGTTTCCATCAAACAGAAAAACAATGAGTTGGATAAAGACATTTAGATTGTAGATGCTGCACTTTGCCTTTGCAAGGCTCTGGGAAACATGTGGATTTTtataaacacattataacacattctATGTCGTTTTACATGACTGAATCTTTTGTAAAACCGCACAAAGGATTGAAATGACAGGCTGCTTTGACACTGATAAACAGAGAATCTGAGATCAATTCAAACGACCTCGTCTGGAATACATCAATagcctaggtgtgtggagacatactgtattgtacaaTATCAGGAGGAAAATgttttccagtttcactgactcggCAAATGATGTGCAGCTCACTCACCGGTGATGGCCGATGCGCTAGTGCCaaaagcttctctctctcttgttttactgtggctaaAGTATAGGCCTACTCCTGGTGTAGTTTCATTCCAGTGAATCTCACTCTAGTTATGGGAGAGATTCAagcgctcttctctctctcaccacagcaACAGCCAAGCATTGGTCTGTCGCTAGCGTACAATGTTGTGCAGACCATAACCTCAGGCTTTGCCCAACACAAATCAACTCAGGATATCAGACACGTTTCCACATGACCTTAATTAGGGGGCAGGAGAATTACAAAGGAGGCAAGTCAAATTAACACGGATGACTTTTTTTGGACAACTAGTCCACTTTGTTTTAGAGTTCTTACATTGCAAACAGTGAAAATAGGATCCGTCTCAAGTGAATCACTCACTGCTTATCATATTTGGCTGGCTAATAAAAAACTTTAAAGCCATTTTTCTCATCTCCATCGTTGGCGCAGTTACTGTGTTTTGACTTTGTAGGGCAGCCTACTGTAGCTGTGTctaatgaatttgagagtggttacatttctccagacccatccctcagctttttttaCCTAAACACAGGCTGGGCGACCACTTTGTTAtcgtttcaattaaggattctaaGTTTAAGCTGTGTTTGAAAACACCTGGCGTTCCCGTCTTAGATAGTGCTCCTGCTTAGCTCCCGACCCCACTGTGTCCCACCAGGAGTGAAGGACATGGCGATGGGATGTGTAGTCTGCAGTGTAGGCCAGATGTGTGCTGTAGAGTAAGTAGTAACAACGTCCTGTGGATGCTTCTGCAAAGTAGTGaaacattaaacaaaacaaaacggATGTCTTACCCTGCCTCACGGAGTATTACCCTCCTCTTCCTTTTTTTAAAACACACCTTAGCTACTCAGTACTTAGGTCACCAATTAAAAGAGTTGTAGGCAATCAGTACATATCGAATATCATCCCCAAGTATTACGGAAAACAGGAGCAGGAGGATGAGTCTCTTATTTAGAAAGCATTGAGGGGAAGTATGAGTAGCATCTTTCTAAGTGCTCAGACTTGACTGAGTGGTTTTGTATTGTTGAATAATGAATGTGCATAAGTGGATCAGGAGGAACTCAAATGTATCTGCCCTTTCCAAGTAGAGGTTACCCACAgaaacagatctaggatcagtttacgctccctaaatcctaaccttaaccgtaaGAGGAGGAAACACtgaactgaccttagatcagcatCTATGGGCATCTTCATCCTAACCGAACAACCAAAATATAACCATGGATGAATATGACATTTTAAAGGTACACTCAGTGAAATTATGTTGTCACAAGCAGCACGGCGGATTATGAGATGAGCAACATGCAAGACTTCGCTCTCACACAGTTGCACACAGTATCTgcacatgtttatttatttattacatttttttgtacctttattttactaggcaagtcagttaagaatacattcttatttacaatgatgacctacccaggccaaacca

Function

NR:

description
heparan sulfate glucosamine 3-O-sulfotransferase 3A1-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576715.2 True 4612 mRNA 0.45 3 7242381 7255769

Neighbor

gene id symbol gene type direction distance location
LOC110498883 LOC106589500 coding upstream 30200 7201876 ~ 7212181 (+)
dhrs7cb dhrs7c coding upstream 47622 7190807 ~ 7194759 (+)
bsk146 LOC106589506 coding upstream 148841 7075481 ~ 7093540 (+)
wu:fj29h11 LOC106589505 coding upstream 168049 7015665 ~ 7074332 (+)
LOC110498876 st2b1 coding upstream 226947 7009744 ~ 7015434 (+)
LOC110498885 glp2r coding downstream 233599 7489368 ~ 7506485 (+)
pts pts coding downstream 269753 7525522 ~ 7528685 (+)
LOC110498886 LOC106589493 coding downstream 279263 7535032 ~ 7579012 (+)
adprm adprm coding downstream 418580 7674349 ~ 7677005 (+)
map2k4b LOC106589490 coding downstream 422046 7611621 ~ 7696279 (+)
G1657389 LOC106589502 non-coding upstream 126339 7114911 ~ 7116042 (+)
G1657368 LOC105030512 non-coding upstream 238825 7003229 ~ 7003556 (+)
G1657366 NA non-coding upstream 240407 7001689 ~ 7001974 (+)
G1657363 NA non-coding upstream 243540 6998363 ~ 6998841 (+)
G1657361 NA non-coding upstream 246316 6995622 ~ 6996065 (+)
G1657423 NA non-coding downstream 1368 7257137 ~ 7261264 (+)
G1657479 LOC106589498 non-coding downstream 10490 7266259 ~ 7267044 (+)
G1657582 NA non-coding downstream 146316 7402085 ~ 7402359 (+)
G1657605 NA non-coding downstream 175272 7431041 ~ 7431260 (+)
G1657606 NA non-coding downstream 175776 7431545 ~ 7431783 (+)
G1656720 NA other upstream 1248631 5990474 ~ 5993750 (+)
G1655848 NA other upstream 2012453 5227552 ~ 5229928 (+)
G1654426 NA other upstream 3286916 3949437 ~ 3955465 (+)
G1654400 NA other upstream 3344991 3897103 ~ 3897390 (+)
G1658572 NA other downstream 448737 7704506 ~ 7705151 (+)
unk LOC106589472 other downstream 1137902 8392044 ~ 8401533 (+)
LOC110498922 cssa28h17orf62 other downstream 1268523 8524125 ~ 8527761 (+)
G1661477 NA other downstream 2795853 10051622 ~ 10052089 (+)
G1662037 NA other downstream 3220398 10476167 ~ 10476689 (+)

Expression


Co-expression Network