pts (pts)


Basic Information

Item Value
gene id pts
gene name pts
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 7525522 ~ 7528685 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575572.2
TGTCTGGGTTTGTGCTGCATGCAAAATATTAGTTGGTtgagagccccacagtggaggttgTCATAATACTCATAAAACCTAGCGTCAAACAGAGTAGTTCCAATGGGTTTTCCACCATTAATGGTTCTCATAGGGaatttttagaaacacttaataagggctgtgtttcgggTAGACTTACCCTGACTTGACcctttgataaccatgtaaatctctctcggataTGGTGACTTTGATCAATATAGTCGGCTGTATTTACACTCGGATTCGAAAACGCTAATTggcatcatgcaagactacaaatccctgcaagctcctgcacgtcatctctagctgacgcctttgctaacaggtattgtgcacaggaggttggtggccgCTTAATTAGGGAAGATGgcctcgtggtaatggctggaattgTTTTGCGGGTAAATACAGGCGAATATATTGACAGTCTCCTTGGCctagagatttacacggttatcaaaatgtcacgccaggCCGATTCAAGAAACGAAGTAGCAGAGCGCATTGGATACATCACACGAGTCCAGAGTTTCAGCGCGTGCCATCGATTGCACAGCCCGACGTTGAGTGATGAGGTAAACAAGAAGATATTTGGGAAGTGCAACAATCCCAATGGCCATGGACACAACTATAAAGtaGAGGTGACGGTACGGGGAAAGATCGATCGTCACACAGGCATGGTGATGAACATTACAGATCTGAAGCAACACATCGAGGAAGTCATCATGATTCCGTTGGACCATAAAAACCTGGATAAGGACGTCCCCTACTTTGCTAATGTTGTCAGCACAACAGAAAACGTGGCTGTATATATCTGGGACAACATGGTCAAGCAGCTACCAGCCAATCTTCTCTACGAGGTCAAGATTCACGAGACTGACAAGAACATTGTTGTATATCGAGGAGAATAGCCAGCCACCTTCAGTACCTTGTAATTAGTACGATCTTTACTAATTTATATTATGTAGTATGCACATCTCACATTTGAGTTCATAGATGGACTTATGCGATGTGTTATGATAGTATTAAAGTGCAGAGTTGAGGTTATCCTATTGAATAGTATTGTGCATCATGTGCTGGTGCAATCCACTCTACAACTTTGTTATAATAATAAATGGAATTGCTTGTGCCTCTCTACAATGCATCTACAATAGAGAACATCTAGAATGTACCTGACTACAGATTGACCACTAGAGTGCAGGATCTGAATGCCTCATAGCCCAGTAAGCAGCTTGACTTGACTGAAatgtctagtttaggggtgtcaaactcattccttggagggcctagtgtctgctggtttttagTTTTTTCTTTTAATTAAGacttagacaaccaggtgaggagagttgctaatcagtgaccttaattcatcaaacAAGTACaagggctcccaagtggcacagcggtctaaggcactgcatttcagtgctagaggcatcacaacAGACCttggcacaattggcccagcgtgtgTTTgaccagggtaggctgtcattgaaaaataagaattcgttcttaactgacttgcctagtttaataaaggttaatACAAACAGGGAGGAGCAAAATCCTGCAGAGACTAAGCCttgtgtggaatgagtttgagaCATGGTATAGTATGTcaaatcatcaacaacaacaaaaaggttcAGAGACTGTCACACTGTTTGTGGGAACAAGCTAAAATGGGCTTAGAAAAGCCATAAATGCTTATTGTTTCATTCTAAATTCTCATCAACTGATATTGATCAattaccatttaaaaaaaaaaaaaaaaaaatcaccttttatttaa

Function

symbol description
pts Predicted to enable 6-pyruvoyltetrahydropterin synthase activity and metal ion binding activity. Predicted to act upstream of or within tetrahydrobiopterin biosynthetic process. Human ortholog(s) of this gene implicated in BH4-deficient hyperphenylalaninemia A and phenylketonuria. Orthologous to human PTS (6-pyruvoyltetrahydropterin synthase).

NR:

description
6-pyruvoyl tetrahydrobiopterin synthase

GO:

id name namespace
GO:0006729 tetrahydrobiopterin biosynthetic process biological_process
GO:0003874 6-pyruvoyltetrahydropterin synthase activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K01737 queD, ptpS, PTS; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575572.2 True 1825 mRNA 0.42 7 7525522 7528685

Neighbor

gene id symbol gene type direction distance location
LOC110498885 glp2r coding upstream 19037 7489368 ~ 7506485 (+)
hs3st3l LOC106589499 coding upstream 269753 7242381 ~ 7255769 (+)
LOC110498883 LOC106589500 coding upstream 313341 7201876 ~ 7212181 (+)
dhrs7cb dhrs7c coding upstream 330763 7190807 ~ 7194759 (+)
bsk146 LOC106589506 coding upstream 431982 7075481 ~ 7093540 (+)
LOC110498886 LOC106589493 coding downstream 6347 7535032 ~ 7579012 (+)
adprm adprm coding downstream 145664 7674349 ~ 7677005 (+)
map2k4b LOC106589490 coding downstream 149130 7611621 ~ 7696279 (+)
LOC110498894 LOC106589486 coding downstream 343116 7871801 ~ 7874233 (+)
LOC110498895 LOC106589487 coding downstream 348734 7877419 ~ 7879861 (+)
G1657606 NA non-coding upstream 93739 7431545 ~ 7431783 (+)
G1657605 NA non-coding upstream 94262 7431041 ~ 7431260 (+)
G1657582 NA non-coding upstream 123163 7402085 ~ 7402359 (+)
G1657479 LOC106589498 non-coding upstream 258478 7266259 ~ 7267044 (+)
G1657423 NA non-coding upstream 264258 7257137 ~ 7261264 (+)
G1658509 NA non-coding downstream 75117 7603802 ~ 7604299 (+)
G1658513 NA non-coding downstream 80298 7608983 ~ 7697018 (+)
G1658536 NA non-coding downstream 113153 7641838 ~ 7655631 (+)
G1658570 NA non-coding downstream 174272 7702957 ~ 7703327 (+)
wu:fj29h11 LOC106589505 other upstream 504438 7015665 ~ 7074332 (+)
G1656720 NA other upstream 1531772 5990474 ~ 5993750 (+)
G1655848 NA other upstream 2295594 5227552 ~ 5229928 (+)
G1654426 NA other upstream 3570057 3949437 ~ 3955465 (+)
G1654400 NA other upstream 3628132 3897103 ~ 3897390 (+)
G1658572 NA other downstream 175821 7704506 ~ 7705151 (+)
unk LOC106589472 other downstream 864986 8392044 ~ 8401533 (+)
LOC110498922 cssa28h17orf62 other downstream 995607 8524125 ~ 8527761 (+)
G1661477 NA other downstream 2522937 10051622 ~ 10052089 (+)
G1662037 NA other downstream 2947482 10476167 ~ 10476689 (+)

Expression


Co-expression Network