Gene
RNA
| Item | Value |
|---|---|
| gene id | map2k4b |
| gene name | LOC106589490 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 7611621 ~ 7696279 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021575569.2 | False | 4048 | mRNA | 0.45 | 13 | 7677815 | 7696279 |
| XM_021575570.2 | False | 4014 | mRNA | 0.45 | 12 | 7677816 | 7696279 |
| TU1898232 | True | 2485 | lncRNA | 0.41 | 2 | 7611621 | 7696253 |
7,560,000
7,570,000
7,580,000
7,590,000
7,600,000
7,610,000
7,620,000
7,630,000
7,640,000
7,650,000
7,660,000
7,670,000
7,680,000
7,690,000
7,700,000
7,710,000
7,720,000
7,730,000
NC_048584.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| adprm | adprm | coding | upstream | 810 | 7674349 ~ 7677005 (+) |
| LOC110498886 | LOC106589493 | coding | upstream | 98803 | 7535032 ~ 7579012 (+) |
| pts | pts | coding | upstream | 149130 | 7525522 ~ 7528685 (+) |
| LOC110498885 | glp2r | coding | upstream | 171330 | 7489368 ~ 7506485 (+) |
| hs3st3l | LOC106589499 | coding | upstream | 422046 | 7242381 ~ 7255769 (+) |
| LOC110498894 | LOC106589486 | coding | downstream | 175522 | 7871801 ~ 7874233 (+) |
| LOC110498895 | LOC106589487 | coding | downstream | 181140 | 7877419 ~ 7879861 (+) |
| dnah9 | dnah9 | coding | downstream | 185051 | 7881330 ~ 8001224 (+) |
| LOC110498900 | NA | coding | downstream | 462564 | 8158843 ~ 8172452 (+) |
| foxk2 | LOC106578866 | coding | downstream | 482317 | 8178596 ~ 8193448 (+) |
| G1658536 | NA | non-coding | upstream | 22184 | 7641838 ~ 7655631 (+) |
| G1658509 | NA | non-coding | upstream | 73516 | 7603802 ~ 7604299 (+) |
| G1657606 | NA | non-coding | upstream | 246032 | 7431545 ~ 7431783 (+) |
| G1657605 | NA | non-coding | upstream | 246555 | 7431041 ~ 7431260 (+) |
| G1657582 | NA | non-coding | upstream | 275456 | 7402085 ~ 7402359 (+) |
| G1658570 | NA | non-coding | downstream | 6678 | 7702957 ~ 7703327 (+) |
| G1658571 | myocd | non-coding | downstream | 7072 | 7703351 ~ 7703678 (+) |
| G1658575 | NA | non-coding | downstream | 10764 | 7707043 ~ 7707244 (+) |
| G1658578 | NA | non-coding | downstream | 15309 | 7711588 ~ 7711906 (+) |
| G1658579 | NA | non-coding | downstream | 15771 | 7712050 ~ 7712345 (+) |
| wu:fj29h11 | LOC106589505 | other | upstream | 656731 | 7015665 ~ 7074332 (+) |
| G1656720 | NA | other | upstream | 1684065 | 5990474 ~ 5993750 (+) |
| G1655848 | NA | other | upstream | 2447887 | 5227552 ~ 5229928 (+) |
| G1654426 | NA | other | upstream | 3722350 | 3949437 ~ 3955465 (+) |
| G1654400 | NA | other | upstream | 3780425 | 3897103 ~ 3897390 (+) |
| G1658572 | NA | other | downstream | 8227 | 7704506 ~ 7705151 (+) |
| unk | LOC106589472 | other | downstream | 697392 | 8392044 ~ 8401533 (+) |
| LOC110498922 | cssa28h17orf62 | other | downstream | 828013 | 8524125 ~ 8527761 (+) |
| G1661477 | NA | other | downstream | 2355343 | 10051622 ~ 10052089 (+) |
| G1662037 | NA | other | downstream | 2779888 | 10476167 ~ 10476689 (+) |
| LOC110498883 | LOC106589500 | coding | upstream | 399440 | 7201876 ~ 7212181 (+) |
| G1657479 | LOC106589498 | non-coding | upstream | 344577 | 7266259 ~ 7267044 (+) |
