Item | Value |
---|---|
gene id | LOC110498897 |
gene name | LOC106589483 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048584.1 |
NCBI id | CM023238.2 |
chromosome length | 46616863 |
location | 8019327 ~ 8084366 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
protein shisa-6 homolog isoform X10 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021575585.2 | False | 3772 | mRNA | 0.50 | 10 | 8019327 | 8084366 |
XM_021575586.2 | False | 3769 | mRNA | 0.50 | 10 | 8019327 | 8084366 |
XM_021575587.2 | False | 3751 | mRNA | 0.50 | 9 | 8019327 | 8084366 |
XM_021575588.2 | False | 3733 | mRNA | 0.50 | 9 | 8019327 | 8084366 |
XM_021575589.2 | False | 3712 | mRNA | 0.50 | 8 | 8019327 | 8084366 |
XM_021575595.2 | True | 3499 | mRNA | 0.49 | 6 | 8019327 | 8084366 |
7,980,000
7,990,000
8,000,000
8,010,000
8,020,000
8,030,000
8,040,000
8,050,000
8,060,000
8,070,000
8,080,000
8,090,000
8,100,000
8,110,000
NC_048584.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
myocd | myocd | coding | downstream | 183046 | 7699285 ~ 7836281 (-) |
LOC110498730 | LOC108271865 | coding | downstream | 356628 | 7654654 ~ 7662699 (-) |
LOC110498893 | LOC106589491 | coding | downstream | 366571 | 7638900 ~ 7652756 (-) |
gas7b | LOC106589492 | coding | downstream | 380794 | 7581918 ~ 7638533 (-) |
LOC110498884 | LOC106589498 | coding | downstream | 742686 | 7266343 ~ 7276641 (-) |
LOC110498903 | wdr45b | coding | upstream | 112826 | 8197192 ~ 8207003 (-) |
trnar-ucg-4 | NA | coding | upstream | 139325 | 8223691 ~ 8223763 (-) |
LOC110498906 | LOC106589479 | coding | upstream | 139724 | 8224090 ~ 8246266 (-) |
LOC110498910 | LOC106589475 | coding | upstream | 274557 | 8358923 ~ 8376264 (-) |
LOC110498913 | h3f3b | coding | upstream | 302619 | 8386968 ~ 8389308 (-) |
G1659521 | NA | non-coding | downstream | 34404 | 7984278 ~ 7984923 (-) |
G1659501 | NA | non-coding | downstream | 68147 | 7950238 ~ 7951180 (-) |
G1658916 | NA | non-coding | downstream | 143280 | 7875122 ~ 7876047 (-) |
G1658911 | NA | non-coding | downstream | 149380 | 7869733 ~ 7869947 (-) |
G1658899 | NA | non-coding | downstream | 159934 | 7859183 ~ 7859393 (-) |
G1659612 | NA | non-coding | upstream | 6962 | 8091328 ~ 8094470 (-) |
G1659624 | NA | non-coding | upstream | 25161 | 8109527 ~ 8109846 (-) |
G1659654 | NA | non-coding | upstream | 70249 | 8154615 ~ 8155025 (-) |
G1659685 | NA | non-coding | upstream | 138575 | 8222941 ~ 8223164 (-) |
G1659698 | NA | non-coding | upstream | 163605 | 8247971 ~ 8248195 (-) |
LOC110498864 | LOC106589517 | other | downstream | 1447872 | 6568700 ~ 6582912 (-) |
G1657869 | LOC106589521 | other | downstream | 1509747 | 6509119 ~ 6509580 (-) |
G1657868 | LOC106589521 | other | downstream | 1511398 | 6505621 ~ 6507929 (-) |
G1657862 | NA | other | downstream | 1519119 | 6499834 ~ 6500208 (-) |
G1657768 | NA | other | downstream | 1639820 | 6377342 ~ 6379507 (-) |
G1661023 | NA | other | upstream | 1314751 | 9399117 ~ 9400947 (-) |
G1661001 | LOC106589450 | other | upstream | 1338417 | 9422783 ~ 9460115 (-) |
G1662039 | NA | other | upstream | 2392597 | 10476963 ~ 10477185 (-) |
LOC110498953 | NA | other | upstream | 3037547 | 11121913 ~ 11158776 (-) |