unk (LOC106589472)



Basic Information


Item Value
gene id unk
gene name LOC106589472
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 8392044 ~ 8401533 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036955715.1
tggaatcaaaccagggtctgtaatgacgcctctagcacagaGATGCACTGCCTTGGACCACTGCGCCACATCATGAAAGCCTACAAATCCCTGCAACTCCTGCACAGCCTCTCTAgttgacacctttgctaacagTTTAAAGGCAAAAGGGGACCGACAATGTTGAACTACATGCCCCACAGTTCTTAGCAAACCCTTCGAACTGACGCTTCCACTTCCTCGTACCAGGCGCAAGCGCGCATCGGTAAAGAATGCGGACTTTGTCGCACACTGGAAACAGAACGCTGGTACAAAAGCTTCAAAGAGGAAAACATGTCGAaaacacacaccaagcccccGTCCTCGTCGGGGGCTACGACCTCCGGTGGAccttcttcctcctcatcctcctcgccCGCAGGTGGCACGACGTCTCCCGCCAACGTCCTGCACGTACAGCCTGAGAAGCCTCAACACTACACGTATCTGAAGGAGTTCAGGACAGAACAGTGTCCTCTGTTTGTGCAGCACAAGTGTACCCAGCACCGGCCCTTTGCCTGCTTCCACTGGCACTTCCTGAACCAGCGGCGCCGCAGGCCCATCCGCAGGCGGGACGGAACCTTCAACTACAGTCCAGACGTCTACTGCACCAAATACGACGAGGGCACAGGCACCTGCTCTGACGGGGAtgaATGTCCGTACCTGCATCGTACGGCGGGCGACACAGAGCGGCGGTACCACCTGAGGTACTATAAGACGGGCTCCTGTATCCACGAGACGGACGGGAAGGGCCACTGCAGTAAGAACGGCTCCCACTGCGCCTTCGCACACGGATCTCATGACCTACGATGTCCCGTCTACGACGTCAGgGAGGTGCAGGTGATGGAGTCTCAGGGGGGGTCGGGGGCTgctgaaggaggagggggggagggccAGTCGGGGCTGGCGGCCAGTACCGCCCTCATTGAGAAGATCCTGAGTGAGGAACCGCGTTGGCAGGataacacCTATGTGTTGTCCCACTACAAGACAGATCTGTGTAAAAAGCCTCCTCGTCTGTGTCGCCAAGGTTACGCCTGTCCGTACTACCACAATAGCAAAGACAGGCGCCGTAgtccacacaaacacaaatacagagcGCTGCCGTGCCCAGCGGTGAAGCACAGTGAGGAGTGGGGAGATCCCAGTAAGTGTGAGGTGGCAGAGGGATGCCAGTACTGCCACACACGCACAGAGCAGCAGTTTCACCCTGAGATCTATAAGTCCACGAAGTGTAATGATATGCAGCAGTGTGGCAGCTGCCCCCGGGGCCCCTTCTGTGCCTTTGCACACCTTGACAACAAGCCCCCTATCAGTGAAGAACCCTCATTTCAGACCCCCAgctccccacctctccccccaGGACCCCAAGACCCTCACCCTGCCCAGGAAGGATGCTCCAGCCCTGGGGGCCGAGGTGGAAGATCTGGGTCTCTGTCTGGAGGTCCGTTCTCCCCATCAGGGGGGGTGTGTGTGGCAGAACAGGGCCTGTTAGGAAGGGTGCTGTCGTTGTGTGAGGACGTGTGTGGGGGAGGCGAACCCCTCTCCCCCTGGGCTGGGGAAGGGGGGTATGGTAGGGCACCGGGGTACGAGAGGGAAGACCATGCCAAACAGAAGAGTTTTACCATGGACCAGCGCAACAGAGAAATAGCGTCTCATCACAGCAAACAGgaCCTGCTGGTGTTCCTCCCAGTGGGTAGTCCTCTGAGTCTGTCCTCCAGTGTTCCCTCCAGCCTGGCAGCCACCCCTCCCAGCCCTGCCCCTCCTGGGCCCCTCCACCagggccaccaccaccatggagcCCCAGCACCAGGCCTCTTCCCGGGCATGAATGCCAACGCACTGCCCTTCTATCCCACCAGCGACACCGTCGAGTCTGTAGTGGAGTCAGCTCTGGATGACCTGGACCTGAATGACTTTGGCATGTCTGCCCTGCAGAGAAGTCTGGACAGCAGCTCAGCTCTTCCCAGAGCCATGCTGGGAGGAAATCAGCTCCAGAGTTCTGCTCCTGTCAACATTCCAGGAACCCTCTGCAGCTCTGCCCCTTTCAGCTCCCCCTCGCCCTCTCCACCAATCAGAGCCCACCAATCGCCATTCTTCTCTTCCCATCTATCGCAGCCCAGCAAATCAGAAAGCAGCTTCTTGGGGCCATCGCATAGCTCTTTAGGTCTGAATGGTATGAGCAGTAGTATCTGGGAGCACCCATCAGGCCAGGGTTCTCCCGGTACGCCCCCGGCCCTGCTACCCACCATGGGCCAGAGCATGGAGACAGTCCGGGTCCGACAGGAACTAGACGATGCTAACAGACTACTGAAACACTGGGACCACACCTGGAGACATACAGCACAGTCGTGGGTGGTGTTGAAGTCTGATGCAGAGGAGTCTCGTGGCTCGGCCGGTCGGTCAGCTCTTGAAGCGGAGCGGGCCAGGCAGGCTGAGGAGGCGGCAAAGAGACAAACCTCCCTTCTCCAGGAGGCGCTGGAGAgcatgaggacaggagagaaCCCTCACTTGGGCCTCCACCAGCTCCAGCTGCTCCACAGACTGCCTCTAGAGTCTGTCCTCAGTTTGCAGGCCCAGCTCTGTACATGTCTACACACTGTGGAACAGGTGGTGTATAGAAAGCAGTGTCAATGTTGTGTGACGTGTGGAGAGCAGGGATCGGTCTCGCTGCCCTGTGGACATGGTCTACTGTGTGACAGCTGCACCAGCTCTACAGAGTGCCCCCTTTGCCCAGAACAGAACCTAGATCAGTTATCCTGACCGAACTCCACTATCTATAGCCCATATATAGATATGGTATCCTCACTCAAAGACCAGCCCAAAGACCAGCCTCCGGTCCATATAGTCACTGATTCaagatcagatttttttttttacatgcacTACCCGTCCATAAGAAGTGATTCAGGATCAGCTTTAACCACAGACCTGGCTTTAACCATTACAAGCTAAAccacaaatctgactcagttgtTAAAGGCATGCATGATCCAGACAGCCATCTCATGATGCAGCCTAAGTGGGCCACCATTTGAAGGAGTACAAGGTTTTAGTTTTTAACATTAGTTATTATTGTTTTGCTAAGGAGACTTATAGTCCGAGGAAGAatagggctgcatctcaatagtatAAAAAggcttcctctcctcgtctccttcacACTGATCTGAAACTACAGGAAGGACATATGGTGGAAGCCTACAAAGAAATTGCAGATTAAGGAAGGAAAGCCATGTTAAACTATTTGGACGCAGCAGTCTGTTTGTTACAGTTTCTGTGCGTGACTGACTCGGTCTGTGTTGCTTACAGATAGTTTCTGTGTGTGACTGACTCAGGTTTGCAGTCTAATATTATTATTCTTTGTTAACATGCTCCCATCTTTCCGGTTAACACAATCAAGAAAAATGTACTATTCAATTGTGTAGTCTGAATTATGCCGATTTTTCATTTAATAACAAGGCGCTTCACGTGAACTCAAATGCCAGCCTTTTCTTTTTATAAAAATCTATGTATAATGTTTTTGGGGCATAATTTACATTTGTAAGCATTTTGATATTTCACAGTATGTCAAACTCATGTCAAATATACATAGTTCTTGTATGTCATGCTTGCTACATGCACTGACTACACCAGGTGTCAGGCTTTGGAAACAGcaggggtgtgtgggtgtgttgataACCAGTGAAAAGACACGATCACTACTATACATAGACCTGGCACAAAGTTCACACCTTGTCCTACTGCATCCACCAACAGTGATTCATTTTGTGTGTTttggtataaaaaaataaaacaaatgtatatttttggA
>XM_021575614.2
TGTATAAACACACCCAAAAACCACTGACGTTAGGATAATTAGTTAAATTGCTCCTGTCGGGTTTGATTTTAAGTATTTTTTACCAGCTATCTCTGGTCTGCATTAGTGTGTACCAATTCTAGTTAGGCAATATAAGTGAGAGGCCTACTGTTGACTGAGTTGGCGTGGTTTGGATTTGTACAGTAGCCCTGGACTGTTTGGGGGCATTTTGTTTCAGGATATGATAATATGCCGTCAAATTACAGTGTATCTGAAGGAGTTCAGGACAGAACAGTGTCCTCTGTTTGTGCAGCACAAGTGTACCCAGCACCGGCCCTTTGCCTGCTTCCACTGGCACTTCCTGAACCAGCGGCGCCGCAGGCCCATCCGCAGGCGGGACGGAACCTTCAACTACAGTCCAGACGTCTACTGCACCAAATACGACGAGGGCACAGGCACCTGCTCTGACGGGGAtgaATGTCCGTACCTGCATCGTACGGCGGGCGACACAGAGCGGCGGTACCACCTGAGGTACTATAAGACGGGCTCCTGTATCCACGAGACGGACGGGAAGGGCCACTGCAGTAAGAACGGCTCCCACTGCGCCTTCGCACACGGATCTCATGACCTACGATGTCCCGTCTACGACGTCAGgGAGGTGCAGGTGATGGAGTCTCAGGGGGGGTCGGGGGCTgctgaaggaggagggggggagggccAGTCGGGGCTGGCGGCCAGTACCGCCCTCATTGAGAAGATCCTGAGTGAGGAACCGCGTTGGCAGGataacacCTATGTGTTGTCCCACTACAAGACAGATCTGTGTAAAAAGCCTCCTCGTCTGTGTCGCCAAGGTTACGCCTGTCCGTACTACCACAATAGCAAAGACAGGCGCCGTAgtccacacaaacacaaatacagagcGCTGCCGTGCCCAGCGGTGAAGCACAGTGAGGAGTGGGGAGATCCCAGTAAGTGTGAGGTGGCAGAGGGATGCCAGTACTGCCACACACGCACAGAGCAGCAGTTTCACCCTGAGATCTATAAGTCCACGAAGTGTAATGATATGCAGCAGTGTGGCAGCTGCCCCCGGGGCCCCTTCTGTGCCTTTGCACACCTTGACAACAAGCCCCCTATCAGTGAAGAACCCTCATTTCAGACCCCCAgctccccacctctccccccaGGACCCCAAGACCCTCACCCTGCCCAGGAAGGATGCTCCAGCCCTGGGGGCCGAGGTGGAAGATCTGGGTCTCTGTCTGGAGGTCCGTTCTCCCCATCAGGGGGGGTGTGTGTGGCAGAACAGGGCCTGTTAGGAAGGGTGCTGTCGTTGTGTGAGGACGTGTGTGGGGGAGGCGAACCCCTCTCCCCCTGGGCTGGGGAAGGGGGGTATGGTAGGGCACCGGGGTACGAGAGGGAAGACCATGCCAAACAGAAGAGTTTTACCATGGACCAGCGCAACAGAGAAATAGCGTCTCATCACAGCAAACAGgaCCTGCTGGTGTTCCTCCCAGTGGGTAGTCCTCTGAGTCTGTCCTCCAGTGTTCCCTCCAGCCTGGCAGCCACCCCTCCCAGCCCTGCCCCTCCTGGGCCCCTCCACCagggccaccaccaccatggagcCCCAGCACCAGGCCTCTTCCCGGGCATGAATGCCAACGCACTGCCCTTCTATCCCACCAGCGACACCGTCGAGTCTGTAGTGGAGTCAGCTCTGGATGACCTGGACCTGAATGACTTTGGCATGTCTGCCCTGCAGAGAAGTCTGGACAGCAGCTCAGCTCTTCCCAGAGCCATGCTGGGAGGAAATCAGCTCCAGAGTTCTGCTCCTGTCAACATTCCAGGAACCCTCTGCAGCTCTGCCCCTTTCAGCTCCCCCTCGCCCTCTCCACCAATCAGAGCCCACCAATCGCCATTCTTCTCTTCCCATCTATCGCAGCCCAGCAAATCAGAAAGCAGCTTCTTGGGGCCATCGCATAGCTCTTTAGGTCTGAATGGTATGAGCAGTAGTATCTGGGAGCACCCATCAGGCCAGGGTTCTCCCGGTACGCCCCCGGCCCTGCTACCCACCATGGGCCAGAGCATGGAGACAGTCCGGGTCCGACAGGAACTAGACGATGCTAACAGACTACTGAAACACTGGGACCACACCTGGAGACATACAGCACAGTCGTGGGTGGTGTTGAAGTCTGATGCAGAGGAGTCTCGTGGCTCGGCCGGTCGGTCAGCTCTTGAAGCGGAGCGGGCCAGGCAGGCTGAGGAGGCGGCAAAGAGACAAACCTCCCTTCTCCAGGAGGCGCTGGAGAgcatgaggacaggagagaaCCCTCACTTGGGCCTCCACCAGCTCCAGCTGCTCCACAGACTGCCTCTAGAGTCTGTCCTCAGTTTGCAGGCCCAGCTCTGTACATGTCTACACACTGTGGAACAGGTGGTGTATAGAAAGCAGTGTCAATGTTGTGTGACGTGTGGAGAGCAGGGATCGGTCTCGCTGCCCTGTGGACATGGTCTACTGTGTGACAGCTGCACCAGCTCTACAGAGTGCCCCCTTTGCCCAGAACAGAACCTAGATCAGTTATCCTGACCGAACTCCACTATCTATAGCCCATATATAGATATGGTATCCTCACTCAAAGACCAGCCCAAAGACCAGCCTCCGGTCCATATAGTCACTGATTCaagatcagatttttttttttacatgcacTACCCGTCCATAAGAAGTGATTCAGGATCAGCTTTAACCACAGACCTGGCTTTAACCATTACAAGCTAAAccacaaatctgactcagttgtTAAAGGCATGCATGATCCAGACAGCCATCTCATGATGCAGCCTAAGTGGGCCACCATTTGAAGGAGTACAAGGTTTTAGTTTTTAACATTAGTTATTATTGTTTTGCTAAGGAGACTTATAGTCCGAGGAAGAatagggctgcatctcaatagtatAAAAAggcttcctctcctcgtctccttcacACTGATCTGAAACTACAGGAAGGACATATGGTGGAAGCCTACAAAGAAATTGCAGATTAAGGAAGGAAAGCCATGTTAAACTATTTGGACGCAGCAGTCTGTTTGTTACAGTTTCTGTGCGTGACTGACTCGGTCTGTGTTGCTTACAGATAGTTTCTGTGTGTGACTGACTCAGGTTTGCAGTCTAATATTATTATTCTTTGTTAACATGCTCCCATCTTTCCGGTTAACACAATCAAGAAAAATGTACTATTCAATTGTGTAGTCTGAATTATGCCGATTTTTCATTTAATAACAAGGCGCTTCACGTGAACTCAAATGCCAGCCTTTTCTTTTTATAAAAATCTATGTATAATGTTTTTGGGGCATAATTTACATTTGTAAGCATTTTGATATTTCACAGTATGTCAAACTCATGTCAAATATACATAGTTCTTGTATGTCATGCTTGCTACATGCACTGACTACACCAGGTGTCAGGCTTTGGAAACAGcaggggtgtgtgggtgtgttgataACCAGTGAAAAGACACGATCACTACTATACATAGACCTGGCACAAAGTTCACACCTTGTCCTACTGCATCCACCAACAGTGATTCATTTTGTGTGTTttggtataaaaaaataaaacaaatgtatatttttggA
>TU1898913
CGCACACTGGAAACAGAACGCTGGTACAAAAGCTTCAAAGAGGAAAACATGTCGAaaacacacaccaagcccccGTCCTCGTCGGGGGCTACGACCTCCGGTGGAccttcttcctcctcatcctcctcgccCGCAGGTGGCACGACGTCTCCCGCCAACGTCCTGCACGTACAGCCTGAGAAGCCTCAACACTACACGTATCTGAAGGAGTTCAGGACAGAACAGTGTCCTCTGTTTGTGCAGCACAAGTGTACCCAGCACCGGCCCTTTGCCTGCTTCCACTGGCACTTCCTGAACCAGCGGCGCCGCAGGCCCATCCGCAGGCGGGACGGAACCTTCAACTACAGTCCAGACGTCTACTGCACCAAATACGACGAGGGCACAGGCACCTGCTCTGACGGGGAtgaATGTCCGTACCTGCATCGTACGGCGGGCGACACAGAGCGGCGGTACCACCTGAGGTACTATAAGACGGGCTCCTGTATCCACGAGACGGACGGGAAGGGCCACTGCAGTAAGAACGGCTCCCACTGCGCCTTCGCACACGGATCTCATGACC

Function


NR:

description
PREDICTED: RING finger protein unkempt homolog isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036955715.1 False 3832 mRNA 0.53 15 8392044 8401533
XM_021575614.2 False 3617 mRNA 0.52 14 8393892 8401533
TU1898913 True 559 TUCP 0.59 3 8393671 8395476

Neighbor


gene id symbol gene type direction distance location
si:ch211-250n8.1 LOC106589473 coding upstream 4487 8376438 ~ 8387557 (+)
itgb4 itgb4 coding upstream 33173 8328298 ~ 8358871 (+)
LOC110498908 LOC106589477 coding upstream 61798 8284537 ~ 8330246 (+)
LOC110498907 NA coding upstream 116096 8268951 ~ 8275948 (+)
mrpl58 ict1 coding upstream 168861 8217154 ~ 8223183 (+)
wbp2 LOC106589470 coding downstream 17335 8418868 ~ 8428583 (+)
LOC110498917 NA coding downstream 66004 8467537 ~ 8475305 (+)
LOC110498922 cssa28h17orf62 coding downstream 122592 8524125 ~ 8527761 (+)
uts2r2 ogfod3 coding downstream 134853 8536386 ~ 8570780 (+)
LOC110498928 LOC106589233 coding downstream 930175 9331708 ~ 9335282 (+)
G1659186 NA non-coding upstream 733 8391066 ~ 8391311 (+)
G1659121 NA non-coding upstream 142098 8249732 ~ 8249946 (+)
G1659118 NA non-coding upstream 146009 8245630 ~ 8246035 (+)
G1659110 NA non-coding upstream 151020 8240825 ~ 8241024 (+)
G1659195 LOC106589471 non-coding downstream 9420 8410953 ~ 8412372 (+)
G1659197 LOC106589471 non-coding downstream 11562 8413095 ~ 8415319 (+)
G1659258 narf non-coding downstream 120225 8521758 ~ 8522796 (+)
G1659267 NA non-coding downstream 131074 8532607 ~ 8532930 (+)
G1658572 NA other upstream 686893 7704506 ~ 7705151 (+)
wu:fj29h11 LOC106589505 other upstream 1370960 7015665 ~ 7074332 (+)
G1656720 NA other upstream 2398294 5990474 ~ 5993750 (+)
G1655848 NA other upstream 3162116 5227552 ~ 5229928 (+)
G1654426 NA other upstream 4436579 3949437 ~ 3955465 (+)
G1661477 NA other downstream 1650089 10051622 ~ 10052089 (+)
G1662037 NA other downstream 2074634 10476167 ~ 10476689 (+)
LOC110499585 NA other downstream 2401151 10802684 ~ 10805251 (+)
LOC110498940 LOC106589438 other downstream 2457622 10850770 ~ 10866995 (+)

Expression



Co-expression Network