LOC118942031


Basic Information

Item Value
gene id LOC118942031
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 8506255 ~ 8509291 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037917.1
ACAAATACAGCCCCTACAAACATGTGATTGGGAATGTTGATTGAGCCCAACAAAAAGTCTAGTGAAAACAGGGAAAAAAAACTATTCAGGCTTTGTCCTCCCTCAGTGCCCATGTTAAAACCTGTCGAGACCTGTCAGAGAGAGACATCATGACAGTGTAATACTGCATCCTGTTggcatttgatttgtttaaggtACCTCCTCCAATGAGAGCCATATCATTTGCAGATTGCCTCAGGAAAGATAGGGAAAGTTAAAAGTGGAATATCCACTCTCTCCACCCACTCACTTCTCCCACAGTTATAACCTGGGACACTGCATTGTATGGATTTATTGGACAGAAGAACCTCCAGAGGCTGTGAGCTTACAGATAACTCACTGGCAAAATGCTTCTGTTGTTTCTGTCTCTGGTTTTGGGAACTCCACAAGGACAAGGGGTTACAGTAACGTGTGACAATATATCGGTTTCAAAAGACCAGCAACTAACACTGTGCTGTACAGTGGATTACACTGCCATAAAAACTATCAAACATGGGACGAAGGGGACCACAAATGACACAACATGTGTTACTGAGTGGTTTGCATGGAAGTATGCAGATAATGTACTACGGGAATGTGGGAAAGACTGTCACAAGATAGAAACGGAAGCACCACACTACTATTATACGAAAGAAAATGTTACAAAAGCTGATGAGGGTAATTACACTTTTTACATTGGCACAAACTGTGGGATTGGTTCAGGGACAACAAGCTTTTTCACTGATGCAGTTACTGCGAAAAGTGTTGACAACTGGAGAAAGCAACAAGTATGGTTAGCTCTGGTTGTCATCATCTGCGTCGTCGCTGTTCTGGGCGTTCTATTGTTTCTAAAAACTTCTCGTTCTGGCAGAAGATTGATGGAACGACTCAAGAGTTCTATGACCCAGAGCAACAACAACACTGATGAGAGCCCTGAAGGTTCAAGAGAGGCCGTTACCCTGGTGCCTGCATAACATTCAGCGTGAGCCAGTTGTCTTGTTGGTTCTTTCGAAATGAACTCCACGTTGACCTCTGCTATGTTGCTGTATGTCAGATGCATTCCATACCAATAAAACACTACTCACTTTTGCACCTAAATTAGTTTTGCACCAACATTTGTGGAATCAGTTAGTGAAATCACTAATAATCGTCTTTCACAGAAAAaagggtgctatctagaaccatccccataggagaaccctttgaataactctggttccaggtagaacccttttcatAACCCTTAAGCTTGTTTACAAAGGGAGTTGGTTTTGGTCTATATATACATTGATGTTGTAATATTCTGTAATATTCTCACAAGCATTGTTTTCATAACTACTAAGCTAAACTTGTTTTTAGTTTTAGCCTAAACTCTGACGTAATTTTCTGGGACTCATGTTTTTTTAATTAATATAAAATGTTATTGATTTGTGTACAAATAAACGTTTGGAAATAACCAGTCTTCATAATGTTATTTCTCTCATATAGAGCTTGTTGTCTTGTGCCGAATTATTATCTCCAACAATAATGTACATTTCAGTTATCACAGCACATAGAGTACCCGTCAGCAGAAAATAACCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037917.1 True 1600 mRNA 0.40 4 8506255 8509291

Neighbor

gene id symbol gene type direction distance location
LOC110498919 LOC106589236 coding downstream 35 8503392 ~ 8506220 (-)
fdxr fdxr coding downstream 4961 8480350 ~ 8501294 (-)
trim65 LOC106589467 coding downstream 39113 8443312 ~ 8467142 (-)
LOC110498732 LOC106589471 coding downstream 90900 8401197 ~ 8415355 (-)
LOC110498913 h3f3b coding downstream 116947 8386968 ~ 8389308 (-)
LOC110498921 narf coding upstream 2145 8511436 ~ 8524038 (-)
hexdc hexdc coding upstream 18067 8527358 ~ 8531341 (-)
LOC110498924 LOC106589234 coding upstream 65906 8575197 ~ 8576515 (-)
LOC110498925 uts2r coding upstream 209917 8719208 ~ 8794591 (-)
LOC110498733 cacna1g coding upstream 331403 8840691 ~ 9039321 (-)
G1659826 NA non-coding downstream 23780 8425595 ~ 8482475 (-)
G1659772 NA non-coding downstream 24239 8475379 ~ 8482016 (-)
G1659821 NA non-coding downstream 83728 8418923 ~ 8422527 (-)
G1659816 NA non-coding downstream 102364 8403019 ~ 8403891 (-)
G1659812 NA non-coding downstream 113758 8392124 ~ 8392497 (-)
G1659861 NA non-coding upstream 643 8509934 ~ 8510204 (-)
G1659866 NA non-coding upstream 22820 8532111 ~ 8532353 (-)
G1659870 NA non-coding upstream 25812 8535103 ~ 8536419 (-)
G1659971 NA non-coding upstream 228774 8738065 ~ 8738264 (-)
G1659972 NA non-coding upstream 229900 8739191 ~ 8739451 (-)
LOC110498864 LOC106589517 other downstream 1934800 6568700 ~ 6582912 (-)
G1657869 LOC106589521 other downstream 1996675 6509119 ~ 6509580 (-)
G1657868 LOC106589521 other downstream 1998326 6505621 ~ 6507929 (-)
G1657862 NA other downstream 2006047 6499834 ~ 6500208 (-)
G1661023 NA other upstream 889826 9399117 ~ 9400947 (-)
G1661001 LOC106589450 other upstream 913492 9422783 ~ 9460115 (-)
G1662039 NA other upstream 1967672 10476963 ~ 10477185 (-)
LOC110498953 NA other upstream 2612622 11121913 ~ 11158776 (-)
G1663264 NA other upstream 3033325 11542616 ~ 11543091 (-)

Expression


Co-expression Network