Gene
RNA
| Item | Value |
|---|---|
| gene id | trnaa-agc-8 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 9329070 ~ 9329142 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnaa-agc-8 | True | 73 | mRNA | 0.59 | 1 | 9329070 | 9329142 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pkd1b | LOC106589455 | coding | downstream | 18220 | 9281357 ~ 9310850 (-) |
| spata20 | spata20 | coding | downstream | 57557 | 9193289 ~ 9271513 (-) |
| LOC110498733 | cacna1g | coding | downstream | 289749 | 8840691 ~ 9039321 (-) |
| LOC110498925 | uts2r | coding | downstream | 534479 | 8719208 ~ 8794591 (-) |
| LOC110498924 | LOC106589234 | coding | downstream | 752555 | 8575197 ~ 8576515 (-) |
| nme2a | LOC106589447 | coding | upstream | 177232 | 9506374 ~ 9513698 (-) |
| LOC110498935 | LOC106589231 | coding | upstream | 219796 | 9548938 ~ 9552737 (-) |
| LOC110498737 | ca10 | coding | upstream | 348758 | 9677900 ~ 9986739 (-) |
| LOC110498936 | LOC106589191 | coding | upstream | 1280605 | 10609747 ~ 10668872 (-) |
| LOC110498937 | LOC106589191 | coding | upstream | 1374239 | 10703381 ~ 10704272 (-) |
| G1660898 | NA | non-coding | downstream | 132183 | 9185730 ~ 9196887 (-) |
| G1660452 | NA | non-coding | downstream | 143959 | 9184824 ~ 9185111 (-) |
| G1660451 | LOC105030512 | non-coding | downstream | 144358 | 9183905 ~ 9184712 (-) |
| G1660449 | NA | non-coding | downstream | 145938 | 9182850 ~ 9183132 (-) |
| G1660433 | NA | non-coding | downstream | 158108 | 9170652 ~ 9170962 (-) |
| G1660967 | LOC106589233 | non-coding | upstream | 2618 | 9331760 ~ 9334929 (-) |
| G1660981 | NA | non-coding | upstream | 28910 | 9358052 ~ 9359601 (-) |
| G1661017 | LOC106589452 | non-coding | upstream | 62743 | 9391885 ~ 9395929 (-) |
| G1660999 | NA | non-coding | upstream | 102639 | 9431781 ~ 9439407 (-) |
| G1661056 | NA | non-coding | upstream | 145447 | 9474589 ~ 9474809 (-) |
| LOC110498913 | h3f3b | other | downstream | 939816 | 8386968 ~ 8389308 (-) |
| LOC110498864 | LOC106589517 | other | downstream | 2757615 | 6568700 ~ 6582912 (-) |
| G1657869 | LOC106589521 | other | downstream | 2819490 | 6509119 ~ 6509580 (-) |
| G1657868 | LOC106589521 | other | downstream | 2821141 | 6505621 ~ 6507929 (-) |
| G1657862 | NA | other | downstream | 2828862 | 6499834 ~ 6500208 (-) |
| G1661023 | NA | other | upstream | 69975 | 9399117 ~ 9400947 (-) |
| G1661001 | LOC106589450 | other | upstream | 93641 | 9422783 ~ 9460115 (-) |
| G1662039 | NA | other | upstream | 1147821 | 10476963 ~ 10477185 (-) |
| LOC110498953 | NA | other | upstream | 1792771 | 11121913 ~ 11158776 (-) |
| G1663264 | NA | other | upstream | 2213474 | 11542616 ~ 11543091 (-) |
