LOC110498736 (LOC106589448)


Basic Information

Item Value
gene id LOC110498736
gene name LOC106589448
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 9483623 ~ 9502788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955726.1
ggggtgtgaatactttctgaaggtactgtaggtAATTGTGGCTAATGTTTGGATTGTGTTGTTTGGTTTTCACTTATTTTCTATCTGTATGGAAATGCAAATGTACGCCTCTGTAATATTGTGCTTCAGATGTTTATGTTGTGAGAAAGAATTAAGAGTTAAGGGTTTTCTGATTTTATTTCAAAGTACACTACAAAGTCATTTTAAATGTAATCTTGAATCTGAACCTTTTGCCAGTTTACTTTGATCCTTTTACTTTTACGATCAAAGATTGTGGTAATTTAACTGGAAGGAGGGTAATTCATTTACATGACAATAGGGATGGTCTGTTTTGTTTTCTACAACTCTCGTTCAACTCTGACCAATCACAGCAAAGTGGGTTAAACTCGCGCGTGCGCTTTCGATACGTTGTGTTTTTGTTGATATCCTGATATTTTTAGGCTCCGAGTTTAGCTTTCTGAAGCTAATAAACCTCcccttttttggggggttttaCTATTATAGCCAATTTAGACAATAATAAAACACCATAGCTAGCTTTATGAAGGGCTGATGGAGAACACAAGGAATTTGGCTGAGCGCACCCCGCGTTCGGAGCGTAAGCGTCAGGACTCGTTCGGTATGTTTGACGGGTACGACAGCTGCAGTGAGGAGAGCACCAGTAGCTCCAGCTCAGAGGACAGTGAGGACGAGGTGCCCTCCATCCCTGCCAGCCTGCCCATCATCAAGAACAATGGACAGGTTTACACCTATCCCGACGGCAAGGCTGGCATGGCCACCTGTGAGATGTGTGGGATGGTTGGAGTGCGAGACGCCTTCTACTCCAAAACTAAACGCTTCTGCAGCGTCTCCTGCTCTAGAAGTTATTCCTCCAACTCTAAAAAAGCCAGTATAATGGCTAGACTCCAGGGTAAACCACCTACGAAAAAGGCTAAGGTGTTACAGAAACAGCCTCTCATGGCGAAGTTGGCAGCTTACGCCCAGTACCAAgcaagtcaacaacaacaaaacctgGCTAAATCAAAAGCAGTAGTTCCTGTTGAATGCTTTGACTGGGGAAGATACATCTGTAGCAATAACCTGGTTGGAGCACCAGTCAGCTGCTTCAAGCATGTCCCTATGGGTATGTGCTGGGGAGACCTAGCTGAAGGAGTGAGGGTGGAGGTGCTCAACTCCGATACTAACCTCTCTACTAAAGTCTACTGGATAGCAGGGATCGTCAAACTTGCAGGGTTCAAGGCTCTGCTGCGGTACGAGGGTTTTGACAACGACACCATCAGGGACTTCTGGTGTAACCTCTGCGTTCCAGAGATCCACCCCGTGGGTTGGTGCGCCTCCAGTGGGAAACCCCTCGTACCTCCCAAATCGATACAGAATAAGTACTCTAACTGGAAAGCTTTTCTTGTGAAGCGACTCACTGGAGCCAAGACACTGCCACCGGACTTTGCTGCTAAGGTCCATGAGAACATGCAGTTCCCTTTTAAGAAGCTGATGCGAGTGGAGGTGGTGGATAAGACGCACCTGTGCCGGACTCGGGTGGCTCTGGTGGAGCAGGTGATCGGGGGAAGGCTGAGGCTCGTCTACGAGGAGAGCTCCGACGACTTCTGGTGTCACATGTACTCCCCGCTCATACACGCCATCGGATGGTCCCGGAGCATCGGACACCGCTTCAAACGATCCGATGTGTCAAAGAAAATCGATGGTCAGATGGACGCCCCCGCCCCGCTGTTTGCCAAGGTGAAGGATGTGGACCAGAATGGTGAATGGTTCAAGGACGGGATGAAACTAGAGGCCATTGACCCTCTAAACCTCTCAGCTATATGTGTAGCCACTGTAAGAAAGGTGTTGGCAGACGGGTACCTCATGATCGCCATCGACGGGTCTGAGGCAGCTGATGGCTCAGACTGGTTTTGCTACCACtccacttctccctccatcttccctgCTGGCTTCTGTGGAATCAACAACATTGAACTCACGCCCCCTAGAGGGTACACTAAACTGCCATTTAAATGGTTTGACTACCTCAGAGAAACGAGTTCAATAGCCGCTCCTGTGAAGCTCTTTAACAAGGATGTTCCAAACCACGGCTTCCGCCAGGGCATGAAGCTGGAGGCCGTGGACCTGATGGATCCCAGGCTGGTGTGTGTTGCCACTGTGACTCGGATCGTCCACCGCCTGTTGCGCATCCACTTTGACGGCTGGGAGGATGAGTACGACCAATGGGTGGACTGCCAATCACCTGACCTCTACCCCGTGGGCTGGTGTCAGCTGACCGGCTACCAGCTACAGCCCCCCGCCGCACAGATGGCCAGAGAAACCCCACCTGCTCTACCTAAGCAGAAGAAGAAAGCCCAACAGTACAAAGGCCAAAAGAAAAAGTCTCTGTTGCGTCTGAAAGAGGAGCCGGCTGAGGTGGATGAGTTCACCTTCTCCCAGGGCATCTCAGATCAGGAGAGCAACGGCTCGGGCAGCTACTACATCAAACAGGAGCCCTGATGATCCGGGGGACAGGGGCCTCGGGCTAGGCCCCCCAACTAGGATAAGACATCTTTAAACCAAGACGAGAACAACAGGGCAGGGAGCATGGAGTGCTCTAAAAGAAAAACATATCCAGAGAAGCCAGTTTCTTACACCCCAATCAGGAGAGAATGCTACTGGGATACAAACACTGAGTGACTTCACGCCCTGAAACCCCAACCCTCACCCACAAATTAAGCTACTTGGGGCTCCCCAAAACCACCCAGGGGTGAGTACCCTTCTGAGCAGCTACAGCCTCAAACCCTGGCGCTCTGATACAGTCACTGAGACAGACATACCATATGAACAAGGCTAACGGGTAACTGGACACTTCCCAAAGCCACCGGCCCAGAAGAGGCCTCTTATGATACCTGGACAATCTGATTTAAAATCCCAATTCCCTGGATGATTGGATACGACTgtggctctctctcttcctccataaTGCATCTATCTAGGGGGCATTGGAGCTCTGGATGCCCAGAAACAGAAGCCTCTCATTTGGGtagtctctctcccccaccctgctAGGCAGGATCTCTGACTCAAAACTTGGGGCCCAAACACACAGTCACCTGGACTAACTGTGACAGATATTTCTGAGCCAGGCCTTGGTTTATTTCTTTCAGGTAAGAAGGCTAGCCGCACATGGCGGGATTTAATTTCACTCGGTCTTGAGAGGGAGGGAACAAGTTGTATAAAGCaggatgattattattatttttcaaacATTTTGCCAGGTGGACTTGCTTTTTATTTGTTAATAGTACTTGAAGTTTTCAGTTGATATTTGTAAAGTTTCTGTTCTTTGTTTGTTTTTGCCCTTTAAATTGGAGGGTTGTTGTTATTTTGACTTCAACGCTGATTTGTTATCAACCtctctttgggggggggtaccgtCGGGAGTGGTGTAGATATTATGAGGATACATATTCATAGATGTGACTGTTCAATATAGATATTAAGAATTGTGATTTGACGAGAGTGGGTTTTGAATAGATGTTGTATAAATCCGAAACCTTGCTGGTGTGATAGGACTGACACTCTCAAACTAGATGGTGTTTGTGTCTTAATAGGGTAACTTGCGTACTACTTAGTATTGGCTATGCATACTAGGTAGTGCTAATGTGTCTATTGGAATACACTAGATAAACACTGTCACAGATTGCACTACAGGAACAAACAACCAGTCTCTTTGGGTTGTTGGAACCACCCTTTACCATGTCAGCAGCTTTAGAATAGAAGGACCGGACTTAGCTAACGTTTGCATCAGTTTTTTTCAAGTACAGGATACAACTCCAGAAACAAAGCTAAACCATGATATACTCTTTATTTTACTCTACCATATTGTCATAACCTATTTTCCTCGAAGAAAACAAGTGTAAACTTAGTAAGTCTGGCCCTAAAAGACAGACATGATTTTAGTAATCAAGCAAAGTTTAATCCTAAAATGATGTTGTAAAGCAGGCAGAAAaacaatgtaggctacatttcatGGATGACTTCCGAGATATGCAAAACCGGTCGTTTTATTTCAGTGGTGTTTTTCCTCTTCTGTATGGGTAGTCCTTTATTTCAGAGCCATATCGATGCGTACTGGTTAAGTATTCAACCGAGCCACTGGATAACACCTTTATTGTTCGTGTTGTCTTTTATTAAACACGGCTTTGTTGATAGTCTGTACGTACATAAAACCAATGGGATCAGATTGGAGTAGGCTATAGCAGGAGAACCTTTCCCATTGGCTTCTTTATTCACCAATTAGAGGTCATACATTTTTATAAGATTCCTGATTGGTTGGAGGAGATCCTCCTGAATTCCTGAATCTGCTTGTGTGTTGTAGCTGGTACTGAGTGGTGACGCATCTGTATCTAGACTTCATTTCTATCTTTGTACTACCTCCTGGTGAGCTTGGCAGTCAAATAGAGACAGGGTTGGGGCTCATTGTGAATTCATGATGGGGTCTCAAATTTGAAATGCAGGTTTGGGCAACTTGATATACCATATGCAAATAAAATAATTATAT
>XM_036955725.1
gggtgtgaatactttctgaaggtactgtaggtAATTGTGGCTAATGTTTGGATTGTGTTGTTTGGTTTTCACTTATTTTCTATCTGTATGGAAATGCAAATGTACGCCTCTGTAATATTGTGCTTCAGATGTTTATGTTGTGAGAAAGAATTAAGAGTTAAGGGTTTTCTGATTTTATTTCAAAGTACACTACAAAGTCATTTTAAATGTAATCTTGAATCTGAACCTTTTGCCAGTTTACTTTGATCCTTTTACTTTTACGATCAAAGATTGTGGTAATTTAACTGGAAGGAGGGTAATTCATTTACATGACAATAGGGATGGTCTGTTTTGTTTTCTACAACTCTCGTTCAACTCTGACCAATCACAGCAAAGTGGGTTAAACTCGCGCGTGCGCTTTCGATACGTTGTGTTTTTGTTGATATCCTGATATTTTTAGGCTCCGAGTTTAGCTTTCTGAAGCTAATAAACCTCcccttttttggggggttttaCTATTATAGCCAATTTAGACAATAATAAAACACCATAGCTAGCTTTATGAAGGGCTGATGGAGAACACAAGGAATTTGGCTGAGCGCACCCCGCGTTCGGAGCGTAAGCGTCAGGACTCGTTCGGTATGTTTGACGGGTACGACAGCTGCAGTGAGGAGAGCACCAGTAGCTCCAGCTCAGAGGACAGTGAGGACGAGGTGCCCTCCATCCCTGCCAGCCTGCCCATCATCAAGAACAATGGACAGGTTTACACCTATCCCGACGGCAAGGCTGGCATGGCCACCTGTGAGATGTGTGGGATGGTTGGAGTGCGAGACGCCTTCTACTCCAAAACTAAACGCTTCTGCAGCGTCTCCTGCTCTAGAAGTTATTCCTCCAACTCTAAAAAAGCCAGTATAATGGCTAGACTCCAGGGTAAACCACCTACGAAAAAGGCTAAGGTGTTACAGAAACAGCCTCTCATGGCGAAGTTGGCAGCTTACGCCCAGTACCAAgcaagtcaacaacaacaaaacctgGCTAAATCAAAAGCAGTAGTTCCTGTTGAATGCTTTGACTGGGGAAGATACATCTGTAGCAATAACCTGGTTGGAGCACCAGTCAGCTGCTTCAAGCATGTCCCTATGGGTATGTGCTGGGGAGACCTAGCTGAAGGAGTGAGGGTGGAGGTGCTCAACTCCGATACTAACCTCTCTACTAAAGTCTACTGGATAGCAGGGATCGTCAAACTTGCAGGGTTCAAGGCTCTGCTGCGGTACGAGGGTTTTGACAACGACACCATCAGGGACTTCTGGTGTAACCTCTGCGTTCCAGAGATCCACCCCGTGGGTTGGTGCGCCTCCAGTGGGAAACCCCTCGTACCTCCCAAATCGATACAGAATAAGTACTCTAACTGGAAAGCTTTTCTTGTGAAGCGACTCACTGGAGCCAAGACACTGCCACCGGACTTTGCTGCTAAGGTCCATGAGAACATGCAGTTCCCTTTTAAGAAGCTGATGCGAGTGGAGGTGGTGGATAAGACGCACCTGTGCCGGACTCGGGTGGCTCTGGTGGAGCAGGTGATCGGGGGAAGGCTGAGGCTCGTCTACGAGGAGAGCTCCGACGACTTCTGGTGTCACATGTACTCCCCGCTCATACACGCCATCGGATGGTCCCGGAGCATCGGACACCGCTTCAAACGATCCGATGTGTCAAAGAAAATCGATGGTCAGATGGACGCCCCCGCCCCGCTGTTTGCCAAGGTGAAGGATGTGGACCAGAATGGTGAATGGTTCAAGGACGGGATGAAACTAGAGGCCATTGACCCTCTAAACCTCTCAGCTATATGTGTAGCCACTGTAAGAAAGGTGTTGGCAGACGGGTACCTCATGATCGCCATCGACGGGTCTGAGGCAGCTGATGGCTCAGACTGGTTTTGCTACCACtccacttctccctccatcttccctgCTGGCTTCTGTGGAATCAACAACATTGAACTCACGCCCCCTAGAGGGTACACTAAACTGCCATTTAAATGGTTTGACTACCTCAGAGAAACGAGTTCAATAGCCGCTCCTGTGAAGCTCTTTAACAAGGATGTTCCAAACCACGGCTTCCGCCAGGGCATGAAGCTGGAGGCCGTGGACCTGATGGATCCCAGGCTGGTGTGTGTTGCCACTGTGACTCGGATCGTCCACCGCCTGTTGCGCATCCACTTTGACGGCTGGGAGGATGAGTACGACCAATGGGTGGACTGCCAATCACCTGACCTCTACCCCGTGGGCTGGTGTCAGCTGACCGGCTACCAGCTACAGCCCCCCGCCGCACAGATGGCCAGAGAAACCCCACCTGCTCTACCTAAGCAGAAGAAGAAAGCCCAACAGTACAAAGGCCAAAAGAAAAAGCGGAAGATTCCGGTTGGTCGACGGCCcttcagtcaggcaggcaggaggAGGAGCCTAtcaggggaggaggaagagcagaGTCCGCCCCCTTACTCCAGCCAGGGCCCCACTATGGTCCCCCGGCCCcgcacccaccaccaccacacccacaaACCAGAGTCTCTGTTGCGTCTGAAAGAGGAGCCGGCTGAGGTGGATGAGTTCACCTTCTCCCAGGGCATCTCAGATCAGGAGAGCAACGGCTCGGGCAGCTACTACATCAAACAGGAGCCCTGATGATCCGGGGGACAGGGGCCTCGGGCTAGGCCCCCCAACTAGGATAAGACATCTTTAAACCAAGACGAGAACAACAGGGCAGGGAGCATGGAGTGCTCTAAAAGAAAAACATATCCAGAGAAGCCAGTTTCTTACACCCCAATCAGGAGAGAATGCTACTGGGATACAAACACTGAGTGACTTCACGCCCTGAAACCCCAACCCTCACCCACAAATTAAGCTACTTGGGGCTCCCCAAAACCACCCAGGGGTGAGTACCCTTCTGAGCAGCTACAGCCTCAAACCCTGGCGCTCTGATACAGTCACTGAGACAGACATACCATATGAACAAGGCTAACGGGTAACTGGACACTTCCCAAAGCCACCGGCCCAGAAGAGGCCTCTTATGATACCTGGACAATCTGATTTAAAATCCCAATTCCCTGGATGATTGGATACGACTgtggctctctctcttcctccataaTGCATCTATCTAGGGGGCATTGGAGCTCTGGATGCCCAGAAACAGAAGCCTCTCATTTGGGtagtctctctcccccaccctgctAGGCAGGATCTCTGACTCAAAACTTGGGGCCCAAACACACAGTCACCTGGACTAACTGTGACAGATATTTCTGAGCCAGGCCTTGGTTTATTTCTTTCAGGTAAGAAGGCTAGCCGCACATGGCGGGATTTAATTTCACTCGGTCTTGAGAGGGAGGGAACAAGTTGTATAAAGCaggatgattattattatttttcaaacATTTTGCCAGGTGGACTTGCTTTTTATTTGTTAATAGTACTTGAAGTTTTCAGTTGATATTTGTAAAGTTTCTGTTCTTTGTTTGTTTTTGCCCTTTAAATTGGAGGGTTGTTGTTATTTTGACTTCAACGCTGATTTGTTATCAACCtctctttgggggggggtaccgtCGGGAGTGGTGTAGATATTATGAGGATACATATTCATAGATGTGACTGTTCAATATAGATATTAAGAATTGTGATTTGACGAGAGTGGGTTTTGAATAGATGTTGTATAAATCCGAAACCTTGCTGGTGTGATAGGACTGACACTCTCAAACTAGATGGTGTTTGTGTCTTAATAGGGTAACTTGCGTACTACTTAGTATTGGCTATGCATACTAGGTAGTGCTAATGTGTCTATTGGAATACACTAGATAAACACTGTCACAGATTGCACTACAGGAACAAACAACCAGTCTCTTTGGGTTGTTGGAACCACCCTTTACCATGTCAGCAGCTTTAGAATAGAAGGACCGGACTTAGCTAACGTTTGCATCAGTTTTTTTCAAGTACAGGATACAACTCCAGAAACAAAGCTAAACCATGATATACTCTTTATTTTACTCTACCATATTGTCATAACCTATTTTCCTCGAAGAAAACAAGTGTAAACTTAGTAAGTCTGGCCCTAAAAGACAGACATGATTTTAGTAATCAAGCAAAGTTTAATCCTAAAATGATGTTGTAAAGCAGGCAGAAAaacaatgtaggctacatttcatGGATGACTTCCGAGATATGCAAAACCGGTCGTTTTATTTCAGTGGTGTTTTTCCTCTTCTGTATGGGTAGTCCTTTATTTCAGAGCCATATCGATGCGTACTGGTTAAGTATTCAACCGAGCCACTGGATAACACCTTTATTGTTCGTGTTGTCTTTTATTAAACACGGCTTTGTTGATAGTCTGTACGTACATAAAACCAATGGGATCAGATTGGAGTAGGCTATAGCAGGAGAACCTTTCCCATTGGCTTCTTTATTCACCAATTAGAGGTCATACATTTTTATAAGATTCCTGATTGGTTGGAGGAGATCCTCCTGAATTCCTGAATCTGCTTGTGTGTTGTAGCTGGTACTGAGTGGTGACGCATCTGTATCTAGACTTCATTTCTATCTTTGTACTACCTCCTGGTGAGCTTGGCAGTCAAATAGAGACAGGGTTGGGGCTCATTGTGAATTCATGATGGGGTCTCAAATTTGAAATGCAGGTTTGGGCAACTTGATATACCATATGCAAATAAAATAATTATAT

Function

NR:

description
PREDICTED: MBT domain-containing protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955726.1 False 4546 mRNA 0.46 16 9483623 9502788
XM_036955725.1 True 4704 mRNA 0.47 17 9483624 9502788

Neighbor

gene id symbol gene type direction distance location
LOC110499583 NA coding upstream 1324 9476862 ~ 9482299 (+)
LOC110498932 LOC106589450 coding upstream 15284 9440645 ~ 9468339 (+)
LOC118942032 NA coding upstream 18569 9462107 ~ 9465054 (+)
LOC110498931 LOC106589451 coding upstream 52757 9401074 ~ 9430866 (+)
LOC110498735 LOC106589194 coding upstream 84808 9363482 ~ 9398815 (+)
LOC110499584 NA coding downstream 535777 10038565 ~ 10041363 (+)
LOC100305179 gna13 coding downstream 1277610 10780398 ~ 10782116 (+)
LOC110499585 NA coding downstream 1299939 10802684 ~ 10805251 (+)
LOC110498938 LOC106589439 coding downstream 1323976 10826764 ~ 10828429 (+)
LOC110498939 LOC106589440 coding downstream 1326430 10829218 ~ 10837113 (+)
G1660500 spata20 non-coding upstream 214947 9268177 ~ 9268676 (+)
G1660499 spata20 non-coding upstream 224832 9258191 ~ 9258791 (+)
G1660457 NA non-coding upstream 289673 9192896 ~ 9193950 (+)
G1660448 NA non-coding upstream 300597 9182803 ~ 9183026 (+)
G1660612 NA non-coding downstream 7529 9510317 ~ 9510536 (+)
G1660613 NA non-coding downstream 8423 9511211 ~ 9511450 (+)
G1660614 NA non-coding downstream 11558 9514346 ~ 9514597 (+)
G1660519 NA non-coding downstream 17021 9519809 ~ 9520023 (+)
G1660625 NA non-coding downstream 28420 9531208 ~ 9531480 (+)
LOC110498922 cssa28h17orf62 other upstream 956103 8524125 ~ 8527761 (+)
unk LOC106589472 other upstream 1088147 8392044 ~ 8401533 (+)
G1658572 NA other upstream 1778472 7704506 ~ 7705151 (+)
wu:fj29h11 LOC106589505 other upstream 2462539 7015665 ~ 7074332 (+)
G1656720 NA other upstream 3489873 5990474 ~ 5993750 (+)
G1661477 NA other downstream 548834 10051622 ~ 10052089 (+)
G1662037 NA other downstream 973379 10476167 ~ 10476689 (+)
LOC110498940 LOC106589438 other downstream 1356367 10850770 ~ 10866995 (+)
G1662536 LOC106589414 other downstream 1802022 11304810 ~ 11306183 (+)

Expression


Co-expression Network