Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110498949 |
| gene name | LOC106589429 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 11000957 ~ 11041454 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| calcium/calmodulin-dependent protein kinase type II delta chain isoform X3 |
| id | description |
|---|---|
| K04515 | CAMK2; calcium/calmodulin-dependent protein kinase (CaM kinase) II |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036955747.1 | False | 4084 | mRNA | 0.47 | 22 | 11000957 | 11041449 |
| XM_036955753.1 | False | 4024 | mRNA | 0.47 | 21 | 11000957 | 11041449 |
| XM_036955749.1 | False | 4001 | mRNA | 0.47 | 21 | 11000957 | 11041450 |
| XM_036955750.1 | False | 3941 | mRNA | 0.47 | 20 | 11000957 | 11041450 |
| XM_036955748.1 | False | 4002 | mRNA | 0.47 | 21 | 11000957 | 11041451 |
| XM_036955751.1 | False | 3918 | mRNA | 0.47 | 20 | 11000957 | 11041451 |
| XM_036955752.1 | False | 3858 | mRNA | 0.47 | 19 | 11000957 | 11041451 |
| XM_036955743.1 | False | 4238 | mRNA | 0.48 | 23 | 11000957 | 11041453 |
| XM_036955744.1 | False | 4178 | mRNA | 0.47 | 22 | 11000957 | 11041453 |
| XM_036955746.1 | False | 4094 | mRNA | 0.47 | 21 | 11000957 | 11041453 |
| XM_036955745.1 | True | 4155 | mRNA | 0.47 | 22 | 11000957 | 11041454 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498947 | LOC106589432 | coding | downstream | 28013 | 10970727 ~ 10972944 (-) |
| LOC110498946 | LOC106589433 | coding | downstream | 33236 | 10963233 ~ 10967721 (-) |
| LOC110498945 | LOC106589434 | coding | downstream | 83252 | 10904484 ~ 10917705 (-) |
| zgc:112285 | LOC106589435 | coding | downstream | 119093 | 10874496 ~ 10881864 (-) |
| LOC110498740 | LOC106589441 | coding | downstream | 175530 | 10805103 ~ 10857526 (-) |
| ptcd1 | LOC106589428 | coding | upstream | 29544 | 11070998 ~ 11079210 (-) |
| LOC110498957 | NA | coding | upstream | 75841 | 11117295 ~ 11118883 (-) |
| LOC110498953 | NA | coding | upstream | 80611 | 11121913 ~ 11158776 (-) |
| LOC110498952 | LOC106589424 | coding | upstream | 94061 | 11135515 ~ 11144237 (-) |
| LOC110498951 | LOC106589423 | coding | upstream | 111077 | 11152531 ~ 11170466 (-) |
| G1662896 | NA | non-coding | downstream | 133990 | 10771090 ~ 10866967 (-) |
| G1663066 | NA | non-coding | upstream | 25479 | 11066933 ~ 11067132 (-) |
| G1662993 | NA | non-coding | upstream | 158111 | 11199565 ~ 11202116 (-) |
| G1663122 | NA | non-coding | upstream | 197072 | 11238526 ~ 11255560 (-) |
| LOC110511226 | NA | non-coding | upstream | 221741 | 11263195 ~ 11272173 (-) |
| G1662995 | NA | non-coding | upstream | 222946 | 11264400 ~ 11269866 (-) |
| G1662039 | NA | other | downstream | 523772 | 10476963 ~ 10477185 (-) |
| G1661001 | LOC106589450 | other | downstream | 1540842 | 9422783 ~ 9460115 (-) |
| G1661023 | NA | other | downstream | 1600010 | 9399117 ~ 9400947 (-) |
| LOC110498913 | h3f3b | other | downstream | 2611703 | 8386968 ~ 8389308 (-) |
| LOC110498864 | LOC106589517 | other | downstream | 4429502 | 6568700 ~ 6582912 (-) |
| G1663264 | NA | other | upstream | 501162 | 11542616 ~ 11543091 (-) |
| G1664239 | NA | other | upstream | 1208696 | 12250150 ~ 12251106 (-) |
| G1665402 | LOC106589366 | other | upstream | 2359827 | 13401281 ~ 13407377 (-) |
| G1666656 | LOC106589183 | other | upstream | 3180745 | 14222199 ~ 14223019 (-) |
