Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110498953 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 11121913 ~ 11158776 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110498953 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021575695.2 | False | 601 | mRNA | 0.50 | 3 | 11122065 | 11123730 |
| TU1903031 | False | 734 | TUCP | 0.47 | 3 | 11121913 | 11123711 |
| TU1903036 | True | 517 | TUCP | 0.48 | 4 | 11122065 | 11158776 |
11,084,000
11,088,000
11,092,000
11,096,000
11,100,000
11,104,000
11,108,000
11,112,000
11,116,000
11,120,000
11,124,000
11,128,000
11,132,000
11,136,000
11,140,000
11,144,000
11,148,000
11,152,000
11,156,000
11,160,000
NC_048584.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498957 | NA | coding | downstream | 3182 | 11117295 ~ 11118883 (-) |
| ptcd1 | LOC106589428 | coding | downstream | 42855 | 11070998 ~ 11079210 (-) |
| LOC110498949 | LOC106589429 | coding | downstream | 80611 | 11000957 ~ 11041454 (-) |
| LOC110498947 | LOC106589432 | coding | downstream | 149121 | 10970727 ~ 10972944 (-) |
| LOC110498946 | LOC106589433 | coding | downstream | 154344 | 10963233 ~ 10967721 (-) |
| LOC110498952 | LOC106589424 | coding | upstream | 11785 | 11135515 ~ 11144237 (-) |
| LOC110498951 | LOC106589423 | coding | upstream | 28801 | 11152531 ~ 11170466 (-) |
| LOC110498958 | NA | coding | upstream | 48797 | 11172527 ~ 11174543 (-) |
| LOC110498956 | NA | coding | upstream | 80187 | 11203917 ~ 11205489 (-) |
| LOC118942034 | NA | coding | upstream | 121865 | 11245595 ~ 11246153 (-) |
| G1663066 | NA | non-coding | downstream | 54933 | 11066933 ~ 11067132 (-) |
| G1663012 | NA | non-coding | downstream | 94413 | 10944093 ~ 11027652 (-) |
| zgc:112285 | LOC106589435 | non-coding | downstream | 244129 | 10874496 ~ 10881864 (-) |
| LOC110498740 | LOC106589441 | non-coding | downstream | 264539 | 10805103 ~ 10857526 (-) |
| G1662903 | NA | non-coding | downstream | 310206 | 10777125 ~ 10811859 (-) |
| G1662993 | NA | non-coding | upstream | 75835 | 11199565 ~ 11202116 (-) |
| G1663122 | NA | non-coding | upstream | 114796 | 11238526 ~ 11255560 (-) |
| LOC110511226 | NA | non-coding | upstream | 139465 | 11263195 ~ 11272173 (-) |
| G1662995 | NA | non-coding | upstream | 140670 | 11264400 ~ 11269866 (-) |
| G1663128 | NA | non-coding | upstream | 155016 | 11278746 ~ 11279092 (-) |
| G1662039 | NA | other | downstream | 644880 | 10476963 ~ 10477185 (-) |
| G1661001 | LOC106589450 | other | downstream | 1661950 | 9422783 ~ 9460115 (-) |
| G1661023 | NA | other | downstream | 1721118 | 9399117 ~ 9400947 (-) |
| LOC110498913 | h3f3b | other | downstream | 2732811 | 8386968 ~ 8389308 (-) |
| LOC110498864 | LOC106589517 | other | downstream | 4550610 | 6568700 ~ 6582912 (-) |
| G1663264 | NA | other | upstream | 418886 | 11542616 ~ 11543091 (-) |
| G1664239 | NA | other | upstream | 1126420 | 12250150 ~ 12251106 (-) |
| G1665402 | LOC106589366 | other | upstream | 2277551 | 13401281 ~ 13407377 (-) |
| G1666656 | LOC106589183 | other | upstream | 3098469 | 14222199 ~ 14223019 (-) |
| G1666788 | NA | other | upstream | 3301243 | 14424973 ~ 14425314 (-) |
| LOC110498954 | NA | coding | upstream | 102373 | 11261149 ~ 11263141 (-) |
| G1662896 | NA | non-coding | downstream | 254946 | 10771090 ~ 10866967 (-) |
