LOC110499003 (LOC105025155)


Basic Information

Item Value
gene id LOC110499003
gene name LOC105025155
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 12985415 ~ 12987990 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575786.2
ATAAAAAAGGAGCGATTGTGCAGGATGGGTTATGTGCAGTGCACCTATTCACGACAATGGACAATGTTTTACTGCGCCAGAGTAAGAAAATAACTGAGGTTCTTACAACTGGCCCACGTCCTGTTTTAGTAGTTAATAGTAGTTAATAGGTAGTTATTAAGGTGCGTGAGTACGGAAATCCGCAAGTTGGGTCTCCAAAACGAAGTTGAATGCATAATGAATAAAGGGAGCACTGAACGCTAAGTGTGGAAGACGCTAAAGATTTGATATGCGCAGAAAAGAGGAGAAATTAGTCAATGGAGAAATCTGACAACGAAACCGCAGGTGCTGAAACGGACAGCTCCAAGCACAGCGTCCGTGCTCTCACCGGGTGCGTCTTGTTCATGCTGATCGTCTCCACGCTTTTTGGGAATACGCTTGTGTGCGCCGCTGTGATCAAATTTCGACACCTTAGATCTAAAGTGACTAACTTTTTTGTAATCTCCTTGGCGGTGTCGGATCTATTCGTGGCCATTCTTGTGATGCCGTGGAAGGCTATGTCTGACGTGGCCGGCTACTGGATCTTCGGCAGCTTCTGTGATACCTGGATAGCTTTTGACATCATGTGCTCCACCGCGTCTATTCTCAATCTTTGCATAATAAGTATGGACCGATACTGGGCAATttcgagcccttttcgatatgaACGTAAAATGACTCAAAGGTTTGCTTTCGTTATGATCGGAGTGGCATGGACCCTCTCCATTCTTATCTCCTTCATTCCCGTCCAGCTCAATTGGCACAAGTCAGAGGAGGAAATGGAAAGAGTGGACGAGACTAATCAAATCAACCAAATAGAGGACTGCAACGCAAGCTTGAATAGCACGTATGCCATATCTTCCTCATTGATCAGTTTTTACATTCCCGTCGTTATTATGGTTGGCACTTACACCCGGATCTACCGGATTGCGCAAACCCAGATCCGGAGAATATCATCCTTGGAGACTGCCGTGGAACACGCACAGAACAATCAGCAAGCAGCCGAGaaaacaaattcattaaaaacaaCCTTTAAAAAAGAAACGAAAGTTTTGAAGACACTCTCTATCATTATGGGAGTGTTTGTATTTTGCTGGCTGCCTTTTTTCGTGGTCAACTGCATAGTACCTTTTTGTGACATTAACAATCTTGGTGATCGCCTGTGCGTAAGTAACACCACGTTTAACATGTTTGTGTGGTTTGGATGGGCAAACTCTTCGTTAAACCCAGTCATATACGCTTTTAATGCTGATTTCAGAAAAGCATTCTCCACCATTCTGGGCTGCAAAAGATACTGTTCCAGTTCTGTAGAAGCTGTCCATTTAAGTAACGAGTTGATGTCTTACCGCCACGACACTACGTTCCAGAACGCAACTATCAATGCCTCTGCGCATTGTGCGCAACGCCTGCCCATGGTCTCACACGGGGAAGATTTGGACCTACCATTTGACAAAGTCTCCGTTGTCTCTAATACCTCACGTAACCAAAGAAACATTATCCTGCCTGCAATACTGCAGCTTGAATGTGAAGCAGAAATATCATTAGATATGATGCCTTTCCCCTCAACTGGACCCAGTGAGTGTTATGTGATTCCAGGTCAAGTTGAGGATCTGTGAAACAAGTCTACATTTTGCTCACTTTGTGTCTTTTTTATGTTTGATCTACAAAAGGGCAGTTATTATCCCTATATTCTGATTTGCCGATGGTTTTATAGTGTGCAATATTCGGGCATATCAGTGTACATAAAAGCATTGGTACAAACCCCAAGTAATTGAGTTGAagataataaaataaaaagattACACTGACCAATAAATGTCTCTTTCTTAATTGTAATTTTTACAACTCATAAGGAAATGTAATTATGCTAATATAATACATTGTGTACtttaataccattccactcaaaataaataaaagatgcATCATGTGTGGGCGAGTAAGTCTTTGATATGGTAAGATGCAGGAAACAAGTAGTATAATTACAGATAATTGGCTGTTTAATTGCAGTGGCAATTATGTGGTAGTTATCTTGTGAATGTAGCAGCAGGTTTAACTATGAAAGCATACCCACTccaggagaggtagagagtgaagAGTACATGTTTGCAAAACATATAAGTGATATATAAAAGCAAACATACATTGGAGCCAAGGTAGACATTTATGGGCCAGTTTCCCGGACAACAGAGATTGTTTTATAGTCCAAggctaggcttaatctgtgtctgggggaGGACAATTTGGCCTGTACTCACAACCATCTCAGAGTAGGAAAATTGGACTAGAATCACTTCTGCCTTGTAAATCATAATGAATTAGAGGGGGTGGGATGTAATCCTAGATAAACACTCCTTCTCTGAAACATTTTGTGAATAAGGGCCCTGGGGCTTCATTTATAACGATGGTGTACATTGACATGTACAAACTTGGCTCACGTCATACATGTATGTTTCCCTTTATAAATCAGACTTGGCGTAAAACGTGTGGAGGACCATCAATGTTTTCTTTTCCAGTGACATTTGACCATTTCTGAAACACAAAAATAATTGCATATT

Function

NR:

description
D(5)-like dopamine receptor

GO: NA

KEGG:

id description
K04144 DRD1; dopamine receptor D1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575786.2 True 2576 mRNA 0.41 1 12985415 12987990

Neighbor

gene id symbol gene type direction distance location
LOC110499001 LOC106589379 coding downstream 36950 12944394 ~ 12948465 (-)
LOC110498996 LOC106589382 coding downstream 173998 12805293 ~ 12811417 (-)
kif20bb LOC106589381 coding downstream 186632 12777485 ~ 12798783 (-)
LOC110498993 LOC106589384 coding downstream 241117 12733052 ~ 12744298 (-)
LOC110498992 LOC106589385 coding downstream 257295 12693063 ~ 12728120 (-)
plce1 plce1 coding upstream 68643 13056633 ~ 13137389 (-)
slc35g1 slc35g1 coding upstream 161531 13149521 ~ 13157107 (-)
LOC110499008 lgi1 coding upstream 169794 13157784 ~ 13170700 (-)
pde6c LOC106589370 coding upstream 219777 13207767 ~ 13252579 (-)
cep55l cep55 coding upstream 269343 13257333 ~ 13272310 (-)
G1664851 NA non-coding downstream 1459 12983753 ~ 12983956 (-)
G1664830 NA non-coding downstream 49232 12935968 ~ 12936183 (-)
G1664827 NA non-coding downstream 51286 12933906 ~ 12934129 (-)
G1664803 NA non-coding downstream 89667 12894385 ~ 12895748 (-)
G1664767 NA non-coding downstream 126875 12858323 ~ 12858540 (-)
G1664859 NA non-coding upstream 350 12988340 ~ 12988620 (-)
G1665167 NA non-coding upstream 13498 13001488 ~ 13001708 (-)
G1665168 NA non-coding upstream 18328 13006318 ~ 13006532 (-)
G1665184 NA non-coding upstream 41128 13029118 ~ 13029752 (-)
G1665188 NA non-coding upstream 42047 13030037 ~ 13030994 (-)
G1664239 NA other downstream 734309 12250150 ~ 12251106 (-)
G1663264 NA other downstream 1442324 11542616 ~ 11543091 (-)
LOC110498953 NA other downstream 1826639 11121913 ~ 11158776 (-)
G1662039 NA other downstream 2508230 10476963 ~ 10477185 (-)
G1661001 LOC106589450 other downstream 3525300 9422783 ~ 9460115 (-)
G1665402 LOC106589366 other upstream 413291 13401281 ~ 13407377 (-)
G1666656 LOC106589183 other upstream 1234209 14222199 ~ 14223019 (-)
G1666788 NA other upstream 1436983 14424973 ~ 14425314 (-)
LOC110499033 LOC107708254 other upstream 1636365 14616546 ~ 14647860 (-)
G1667100 LOC106589344 other upstream 1902385 14890375 ~ 14897681 (-)

Expression


Co-expression Network