cep55l (cep55)


Basic Information

Item Value
gene id cep55l
gene name cep55
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 13257333 ~ 13272310 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575801.2
TTTAAAAAGGACTGTCAGCGTCATGATCTGACTCCCGGATATGACGCCCAGACGCGCTGTAATTCAAACTTTTCAACTAGGAAGCTAGAAAGTGGCAATTTCATTCTCAGAAGTCAAGCGTTCTACAATGTTATTTTGGAAACAGTGGTCTATATTGTAACACTCCAGACATGGCATCAAAAGGCACCAAGGAGACCATTGTCAACAAGTTAGGCTTTAAATCCAGTGGCTCAAAACAGGCAGAAGCAGAAATGGACAGACTCAGGAAGGAGAATGCTCATCTGAAGCAGAAGATGgatgaaatatcaaaacgaacaaCGAGGCCACCAGACTCTGACAAAAGCAAACTGCTGGAGAGGATTCTGTCTCTGGAGACGTCGAGGGAGAGGAACACTCAGCAGCTGCTGGCTAAGGACAAGGAGCTGGAGACTCTGAGACAACATCTGCATTCCAATGGGGGAGAGGTGGTGGCCTCGCTCCAGGCTCAGCTGGaccaggggaggagagaggccgAGTACAGAGAGAAACTGTTCCAGTCCCTCTCGGAGGAGACAGGGAATCTGAAGAACAAATTGGTGGGAGTGTCGGCAAGGTGTCAGGCACTGGAGAAACAGGGTCCTGATTTACAGAATGGCCAGGGACTCACCGGTGAGGTTGCAGTAGTTGAGGATCACTTGAGAGATGCTTTGGAGAAGAATCAACAGTGGCTGGTTTATGATCAGCAGCGAGAGGCCTATGTCAAGGCAGTCCTGGCCAGGACCCTTGAGATGGAGCAGCAACTAAATCAAGCCAACGAAGCactccaacaacaacacaaagaaggCAGTTTGGACGCACCAGAGAAGTCTTTGTCCCAGCTGCAGGAGCACTACGACAAGCTGCTGCTGCAGGCCAAGCAGGACGTGGAGGCCCAGAAGGAGGCGGCGGCACGGGCCCAGGGGGAGCTGGGCGAGCTCCAGAGGCGGTACGAGGAGCGGTGCATGGAGTTGGTCGAGGCCCGGGAGCAGCTCCGGGCCGAGCGCCTCAGCAGCAGATACACAGTCGGCGAGGAGAAGAAGTGCTCGGCTGACCGCGCCGACAGAATGCGGTCCGAGCTGGACAGCATGGACGCcaggctggaggaggagaggaagaggtctGCTGAGCTGCTGCTGCAGGTGAATCTACTCCAGAAAACTCTGTTAAACCAAAATGAGGAGCGGAGGAGAGTTGCTGTACTGGAGCAACATATCCAGCTATCTGCCAAAGACTTTGAGAACGAGAAGCTTGATCGACAGAGTTTACAGCATCAGCTGCACAAGGTCCTGAAAGAGCTGCGCAAGGCTCGGGACCAAATCGCAAGACTAGAATCTAGCAATCAAAAACAGCAGAGCGAGTCTTGTTTCTCTGAGCCAAGTTCTTACAAGCCTGAGTTTGAGAGGCTGTCCATTGAGGATCCCATCCCCACCTCAACCTCCAAAAACCTCCTGGACGAGAGTTTCCTGGAGTGTCCAAAGTGCAGAGCTCCATACGCCACCAGTCAGCACAGAGAACTGCTGGCCCACCTCGACTACTGTTTCACTTGAACAGCCTATAGGGGATTAAAAAGGGAGTACATCTGTCCAGTCTGTCTTGCTTTTGTCTTTAAGATATTATTTTTacatgacacattttttttttgttcatgCCGTGTTGTTTTTAAAGTGAAACATCAGTGATCTAACTGTAAGATCCTGAAGATTTGTTTACCAGTCTTTTGTTTCAAAAGAAATCAGTGACTTTTTGACAAGAATAAACTATTTTCTGAAATCTTTTTTTAGATGGAAAA
>XM_021575803.2
TTTAAAAAGGACTGTCAGCGTCATGATCTGACTCCCGGATATGACGCCCAGACGCGCTGTAATTCAAACTTTTCAACTAGGAAGCTAGAAAGTGGCAATTTCATTCTCAGAAGTCAAGCGTTCTACAATGTTATTTTGGAAACAGTGGTCTATATTGTAACACTCCAGACATGGCATCAAAAGGCACCAAGGAGACCATTGTCAACAAGTTAGGCTTTAAATCCAGTGGCTCAAAACAGGCAGAAGCAGAAATGGACAGACTCAGGAAGGAGAATGCTCATCTGAAGCAGAAGATGgatgaaatatcaaaacgaacaaCGAGGCCACCAGACTCTGACAAAAGCAAACTGCTGGAGAGGATTCTGTCTCTGGAGACGTCGAGGGAGAGGAACACTCAGCAGCTGCTGGCTAAGGACAAGGAGCTGGAGACTCTGAGACAACATCTGCATTCCAATGGGGGAGAGGTGGTGGCCTCGCTCCAGGCTCAGCTGGaccaggggaggagagaggccgAGTACAGAGAGAAACTGTTCCAGTCCCTCTCGGAGGAGACAGGGAATCTGAAGAACAAATTGGTGGGAGTGTCGGCAAGGTGTCAGGCACTGGAGAAACAGGGTCCTGATTTACAGAATGGCCAGGGACTCACCGGTGAGGTTGCAGTAGTTGAGGATCACTTGAGAGATGCTTTGGAGAAGAATCAACAGTGGCTGGTTTATGATCAGCAGCGAGAGGCCTATGTCAAGGCAGTCCTGGCCAGGACCCTTGAGATGGAGCAGCAACTAAATCAAGCCAACGAAGCactccaacaacaacacaaagaaggCAGTTTGGACGAGAAGTCTTTGTCCCAGCTGCAGGAGCACTACGACAAGCTGCTGCTGCAGGCCAAGCAGGACGTGGAGGCCCAGAAGGAGGCGGCGGCACGGGCCCAGGGGGAGCTGGGCGAGCTCCAGAGGCGGTACGAGGAGCGGTGCATGGAGTTGGTCGAGGCCCGGGAGCAGCTCCGGGCCGAGCGCCTCAGCAGCAGATACACAGTCGGCGAGGAGAAGAAGTGCTCGGCTGACCGCGCCGACAGAATGCGGTCCGAGCTGGACAGCATGGACGCcaggctggaggaggagaggaagaggtctGCTGAGCTGCTGCTGCAGGTGAATCTACTCCAGAAAACTCTGTTAAACCAAAATGAGGAGCGGAGGAGAGTTGCTGTACTGGAGCAACATATCCAGCTATCTGCCAAAGACTTTGAGAACGAGAAGCTTGATCGACAGAGTTTACAGCATCAGCTGCACAAGGTCCTGAAAGAGCTGCGCAAGGCTCGGGACCAAATCGCAAGACTAGAATCTAGCAATCAAAAACAGCAGAGCGAGTCTTGTTTCTCTGAGCCAAGTTCTTACAAGCCTGAGTTTGAGAGGCTGTCCATTGAGGATCCCATCCCCACCTCAACCTCCAAAAACCTCCTGGACGAGAGTTTCCTGGAGTGTCCAAAGTGCAGAGCTCCATACGCCACCAGTCAGCACAGAGAACTGCTGGCCCACCTCGACTACTGTTTCACTTGAACAGCCTATAGGGGATTAAAAAGGGAGTACATCTGTCCAGTCTGTCTTGCTTTTGTCTTTAAGATATTATTTTTacatgacacattttttttttgttcatgCCGTGTTGTTTTTAAAGTGAAACATCAGTGATCTAACTGTAAGATCCTGAAGATTTGTTTACCAGTCTTTTGTTTCAAAAGAAATCAGTGACTTTTTGACAAGAATAAACTATTTTCTGAAATCTTTTTTTAGATGGAAAA
>TU1905615
ttgaaaaatcataatcggtcgacctctaatctgcaGTGCTCTCTTGATTTGCTCTTGTCTATTCCCCCAAGATCCAGCTATCTGCCAAAGACTTTGAGAACGAGAAGCTTGATCGACAGAGTTTACAGCATCAGCTGCACAAGGTCCTGAAAGAGCTGCGCAAGGCTCGGGACCAAATCGCAAGACTAGAATCTAGCAATCAAAAACAGCAGAGCGAGTCTTGTTTCTCTGAGCCAAGTTCTTACAAGCCTGAGTTTGAGAGGCTGTCCATTGAGGATCCCATCCCCACCTCAACCTCCAAAAACCTCCTGGACGAGAGTTTCCTGGAGTGTCCAAAGTGCAGAGCTCCATACGCCACCAGTCAGCACAGAGAACTGCTGGCCCACCTCGACTACTGTTTCACTTGAACAGCCTATAGGGGATTAAAAAGGGAGTACATCTGTCCAGTCTGTCTTGCTTTTGTCTTTAAGATATTATTTTTacatgacacattttttttttgttcatgCC

Function

symbol description
cep55 Enables identical protein binding activity. Involved in cranial skeletal system development; establishment of protein localization; and midbody abscission. Acts upstream of or within mitotic cytokinesis. Located in Flemming body; centriolar satellite; and plasma membrane. Implicated in multinucleated neurons, anhydramnios, renal dysplasia, cerebellar hypoplasia and hydranencephaly.

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575801.2 False 1807 mRNA 0.50 9 13257333 13272310
XM_021575803.2 False 1801 mRNA 0.50 9 13257333 13272310
TU1905615 True 510 lncRNA 0.46 2 13257472 13258115

Neighbor

gene id symbol gene type direction distance location
pde6c LOC106589370 coding downstream 4754 13207767 ~ 13252579 (-)
LOC110499008 lgi1 coding downstream 86633 13157784 ~ 13170700 (-)
slc35g1 slc35g1 coding downstream 100226 13149521 ~ 13157107 (-)
plce1 plce1 coding downstream 119944 13056633 ~ 13137389 (-)
LOC110499003 LOC105025155 coding downstream 269343 12985415 ~ 12987990 (-)
LOC110498744 NA coding upstream 33880 13306190 ~ 13309377 (-)
LOC118942003 NA coding upstream 270511 13542821 ~ 13550848 (-)
LOC110499015 LOC106589364 coding upstream 396627 13668937 ~ 14093823 (-)
LOC110499016 LOC106589362 coding upstream 950860 14223170 ~ 14270879 (-)
LOC110499023 argi1 coding upstream 1190087 14462397 ~ 14468271 (-)
G1665263 rbp non-coding downstream 8920 13240482 ~ 13248413 (-)
G1665270 NA non-coding downstream 50071 13206417 ~ 13207262 (-)
G1665264 NA non-coding downstream 70666 13186415 ~ 13186667 (-)
G1665189 NA non-coding downstream 176297 13049344 ~ 13081036 (-)
G1665188 NA non-coding downstream 226339 13030037 ~ 13030994 (-)
G1665406 NA non-coding upstream 140723 13413033 ~ 13413348 (-)
G1665407 NA non-coding upstream 142617 13414927 ~ 13415231 (-)
G1665419 NA non-coding upstream 158397 13430707 ~ 13431621 (-)
G1665526 NA non-coding upstream 316908 13589218 ~ 13589438 (-)
G1666557 NA non-coding upstream 737584 14009894 ~ 14010228 (-)
G1664239 NA other downstream 1006227 12250150 ~ 12251106 (-)
G1663264 NA other downstream 1714242 11542616 ~ 11543091 (-)
LOC110498953 NA other downstream 2098557 11121913 ~ 11158776 (-)
G1662039 NA other downstream 2780148 10476963 ~ 10477185 (-)
G1661001 LOC106589450 other downstream 3797218 9422783 ~ 9460115 (-)
G1665402 LOC106589366 other upstream 128971 13401281 ~ 13407377 (-)
G1666656 LOC106589183 other upstream 949889 14222199 ~ 14223019 (-)
G1666788 NA other upstream 1152663 14424973 ~ 14425314 (-)
LOC110499033 LOC107708254 other upstream 1352045 14616546 ~ 14647860 (-)
G1667100 LOC106589344 other upstream 1618065 14890375 ~ 14897681 (-)

Expression


Co-expression Network