LOC110499054 (adap1)


Basic Information

Item Value
gene id LOC110499054
gene name adap1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 16091814 ~ 16133094 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575886.2
GAGCAAACGTATCTCCAAGTCTGATCAAGAACATACAAGAATGTTTTGGGAAAGTGAACTGAACACACCCCTGCTGTGGTGCCTAGTTGAAACAAAATCTTGCAGTACTCCTAGAACCAAGTTGCCTACTCCTGCTCTAGGATCCTGTGGTGAAAGGACTGCTGTGCAAGAGCCAGACTGGGCTTCAGTGActctgggtgtgtttgtgtgccaggGCTGTTCCCTCCTCCACAGAGGCATCCCCCACATCAGCAGGGTCAAGTCTGTTCAGCAGGAGATATGGGACGCCTCAGAGGTTGAGCTAATGGCTGCCATGGGTAATGAACCAGCCAAAGCAAAGTATGAACAGAAGGTTCCAGCATTCTACTACAGACCCAAACACACAGACTGCAAGCTACTGCGGGAGCAGTGGATCCGAGCCAGGTACGAGAGGAACGAGTTTGAGTTCATCGAGAAACAGGAGCCATACTCTGCAGGGTACAGAGAGGGGTTTCTATGGAAACGCGGGCGAGACAACGGCCAGTTCCTCAGCCGGAAATTCATCCTGTCAGAACGAGAGGGGGCGCTCAAGTATTTCAACAAGCAGGACGCGCGGGACCCCAAGGCAGTGATGAAGATCGAGACTCTCAATGCCACGTTCCAGCCGGCTAAGATAGGCAACCCCTACGGCCTGCAGATTACTTACTTGAGAGACAACAGCACCAGGAACATCTTTGTCTACCACAGCGATTCTAAGGAAATGGTGGACTGGTTCAACGCTATCAGAGCTGCCAGGTTCCATTACCTTCAGGTGGCCTTCCCTGGAGCCAGTGATGAGGAGCTGGTGCCCAAACTGACACGTAGCTTCATGAAAGAGGGCTTCATGGAGAAGACAGGCCCAAAGCACACAGAGGGCTTTAAGAAAAGGTGGTTCACCATGGACGACAGGAGACTCATGTACTTCAAAGATCCTCTGgaCGCCTATGCAAGGGGAGAGGTGTTCATCGGCAGTAAAGAGAACAGCTACACCGTGCTCCCAGGCCTTCCCCCCTCAACACAGGGCTACCACTGGAACCATGGCATCACCATAGTAACACCAGACAGGAAGTTCCTGTTTGCCTGCGAGACGGAGGCGGAGCAGAGGGACTGGATCGCTGCCTTCCAGAGGGTCATCAACAGACCCATGAGACCACAAGAGTACGCAGTGGAGGCCCATTTCAAACACAAGCCCTGAGACTGGAGCTAGAGCTGTCACTCTACTGGTCAGCTCAAGTCCCACcaagaacagaacagacaggatTTCTCTGCAGAGACCCCAGAATAACACAAGTCTCTACTGTACCTGGAGCGACGGAACGAAATGATAGAGATGGAAGAAATATatcagagaggagagtgaaaaACAATAAAAGGTCTTACATCTCAACCTCTTCTGAACCTGATGCCTAAAccgggggttagaggtcaggggtcaggggatTTGAGAGGAGAGAAAATAACACTGAAATATCAATTCCCCTGCTGCCGCTCTCCACATAGACTCTTCCACACTGCACCCCCGCTCTTAGTGTTGTGAGTGGTTCCTCCCTTGTTGTATACTAATGAGTCATGTTCACTCTGTTTGTTGAGAGCAGTACTGTAAATGTAATTTATTGATTGGACAGTTTTGATGACAGTGGATTTATGCAATTTCTCTGATTGTTCTAAACGTATGCTTTTAGGCAGGGTTATACACATCTCGTGGCTGTTTATTTTGAAATATAAATGTGAATGTAAATATTTTGTTACTTCATGCAACAGGGTTGTAATTGATTTAATATTAACTGATTCAATCAAATTGTGTTTATCATTGAAAGACACTAGATGGCACTCTAGGCCATTGTAATACATCACCCATGATGTGCATTGTCATTCTATTGGTCTGCCGCTGTAATAAACTCGACAGGGATCCAAGCTGAGAACAA
>XM_021575888.2
CACTGGAGGTCTCACTGCGACTGCAGACACATGAGTTGGAGGAGAATGAGGGGATGACACAGACTTCAGATAATGCAGTCAGCAAGACTTCGTAATAGAGCTGTAGTTTACAAGATAGAGACTTGTCAAACCTTCAAATCATCTCATCCAAGCGGATTTCTAATAGGCTTTTCATTAGCTTTTTTTGTTCAAAACCAGGAgaattttttgttcagtatttcgAGTAGTCTACAAGGTCACAATTGCATTTTTGCTTTATCCCAGTGAACGTGCTTTGTATTGAAGTCTTTCGGATTGGGTGGAGATCAAACGGCGATGGAGTCGGAGAGGAATAAACGGCTCTTGCAAGATGTCCTGGCCAGACCTGGAAACGATGTATGTGCAGACTGCGGCAATGCAGAGCCAGACTGGGCTTCAGTGActctgggtgtgtttgtgtgccaggGCTGTTCCCTCCTCCACAGAGGCATCCCCCACATCAGCAGGGTCAAGTCTGTTCAGCAGGAGATATGGGACGCCTCAGAGGTTGAGCTAATGGCTGCCATGGGTAATGAACCAGCCAAAGCAAAGTATGAACAGAAGGTTCCAGCATTCTACTACAGACCCAAACACACAGACTGCAAGCTACTGCGGGAGCAGTGGATCCGAGCCAGGTACGAGAGGAACGAGTTTGAGTTCATCGAGAAACAGGAGCCATACTCTGCAGGGTACAGAGAGGGGTTTCTATGGAAACGCGGGCGAGACAACGGCCAGTTCCTCAGCCGGAAATTCATCCTGTCAGAACGAGAGGGGGCGCTCAAGTATTTCAACAAGCAGGACTTTGTGTATCTCCCCCAGGCGCGGGACCCCAAGGCAGTGATGAAGATCGAGACTCTCAATGCCACGTTCCAGCCGGCTAAGATAGGCAACCCCTACGGCCTGCAGATTACTTACTTGAGAGACAACAGCACCAGGAACATCTTTGTCTACCACAGCGATTCTAAGGAAATGGTGGACTGGTTCAACGCTATCAGAGCTGCCAGGTTCCATTACCTTCAGGTGGCCTTCCCTGGAGCCAGTGATGAGGAGCTGGTGCCCAAACTGACACGTAGCTTCATGAAAGAGGGCTTCATGGAGAAGACAGGCCCAAAGCACACAGAGGGCTTTAAGAAAAGGTGGTTCACCATGGACGACAGGAGACTCATGTACTTCAAAGATCCTCTGgaCGCCTATGCAAGGGGAGAGGTGTTCATCGGCAGTAAAGAGAACAGCTACACCGTGCTCCCAGGCCTTCCCCCCTCAACACAGGGCTACCACTGGAACCATGGCATCACCATAGTAACACCAGACAGGAAGTTCCTGTTTGCCTGCGAGACGGAGGCGGAGCAGAGGGACTGGATCGCTGCCTTCCAGAGGGTCATCAACAGACCCATGAGACCACAAGAGTACGCAGTGGAGGCCCATTTCAAACACAAGCCCTGAGACTGGAGCTAGAGCTGTCACTCTACTGGTCAGCTCAAGTCCCACcaagaacagaacagacaggatTTCTCTGCAGAGACCCCAGAATAACACAAGTCTCTACTGTACCTGGAGCGACGGAACGAAATGATAGAGATGGAAGAAATATatcagagaggagagtgaaaaACAATAAAAGGTCTTACATCTCAACCTCTTCTGAACCTGATGCCTAAAccgggggttagaggtcaggggtcaggggatTTGAGAGGAGAGAAAATAACACTGAAATATCAATTCCCCTGCTGCCGCTCTCCACATAGACTCTTCCACACTGCACCCCCGCTCTTAGTGTTGTGAGTGGTTCCTCCCTTGTTGTATACTAATGAGTCATGTTCACTCTGTTTGTTGAGAGCAGTACTGTAAATGTAATTTATTGATTGGACAGTTTTGATGACAGTGGATTTATGCAATTTCTCTGATTGTTCTAAACGTATGCTTTTAGGCAGGGTTATACACATCTCGTGGCTGTTTATTTTGAAATATAAATGTGAATGTAAATATTTTGTTACTTCATGCAACAGGGTTGTAATTGATTTAATATTAACTGATTCAATCAAATTGTGTTTATCATTGAAAGACACTAGATGGCACTCTAGGCCATTGTAATACATCACCCATGATGTGCATTGTCATTCTATTGGTCTGCCGCTGTAATAAACTCGACAGGGATCCAAGCTGAGAACAA
>XM_021575889.2
CACTGGAGGTCTCACTGCGACTGCAGACACATGAGTTGGAGGAGAATGAGGGGATGACACAGACTTCAGATAATGCAGTCAGCAAGACTTCGTAATAGAGCTGTAGTTTACAAGATAGAGACTTGTCAAACCTTCAAATCATCTCATCCAAGCGGATTTCTAATAGGCTTTTCATTAGCTTTTTTTGTTCAAAACCAGGAgaattttttgttcagtatttcgAGTAGTCTACAAGGTCACAATTGCATTTTTGCTTTATCCCAGTGAACGTGCTTTGTATTGAAGTCTTTCGGATTGGGTGGAGATCAAACGGCGATGGAGTCGGAGAGGAATAAACGGCTCTTGCAAGATGTCCTGGCCAGACCTGGAAACGATGTATGTGCAGACTGCGGCAATGCAGAGCCAGACTGGGCTTCAGTGActctgggtgtgtttgtgtgccaggGCTGTTCCCTCCTCCACAGAGGCATCCCCCACATCAGCAGGGTCAAGTCTGTTCAGCAGGAGATATGGGACGCCTCAGAGGTTGAGCTAATGGCTGCCATGGGTAATGAACCAGCCAAAGCAAAGTATGAACAGAAGGTTCCAGCATTCTACTACAGACCCAAACACACAGACTGCAAGCTACTGCGGGAGCAGTGGATCCGAGCCAGGTACGAGAGGAACGAGTTTGAGTTCATCGAGAAACAGGAGCCATACTCTGCAGGGTACAGAGAGGGGTTTCTATGGAAACGCGGGCGAGACAACGGCCAGTTCCTCAGCCGGAAATTCATCCTGTCAGAACGAGAGGGGGCGCTCAAGTATTTCAACAAGCAGGACGCGCGGGACCCCAAGGCAGTGATGAAGATCGAGACTCTCAATGCCACGTTCCAGCCGGCTAAGATAGGCAACCCCTACGGCCTGCAGATTACTTACTTGAGAGACAACAGCACCAGGAACATCTTTGTCTACCACAGCGATTCTAAGGAAATGGTGGACTGGTTCAACGCTATCAGAGCTGCCAGGTTCCATTACCTTCAGGTGGCCTTCCCTGGAGCCAGTGATGAGGAGCTGGTGCCCAAACTGACACGTAGCTTCATGAAAGAGGGCTTCATGGAGAAGACAGGCCCAAAGCACACAGAGGGCTTTAAGAAAAGGTGGTTCACCATGGACGACAGGAGACTCATGTACTTCAAAGATCCTCTGgaCGCCTATGCAAGGGGAGAGGTGTTCATCGGCAGTAAAGAGAACAGCTACACCGTGCTCCCAGGCCTTCCCCCCTCAACACAGGGCTACCACTGGAACCATGGCATCACCATAGTAACACCAGACAGGAAGTTCCTGTTTGCCTGCGAGACGGAGGCGGAGCAGAGGGACTGGATCGCTGCCTTCCAGAGGGTCATCAACAGACCCATGAGACCACAAGAGTACGCAGTGGAGGCCCATTTCAAACACAAGCCCTGAGACTGGAGCTAGAGCTGTCACTCTACTGGTCAGCTCAAGTCCCACcaagaacagaacagacaggatTTCTCTGCAGAGACCCCAGAATAACACAAGTCTCTACTGTACCTGGAGCGACGGAACGAAATGATAGAGATGGAAGAAATATatcagagaggagagtgaaaaACAATAAAAGGTCTTACATCTCAACCTCTTCTGAACCTGATGCCTAAAccgggggttagaggtcaggggtcaggggatTTGAGAGGAGAGAAAATAACACTGAAATATCAATTCCCCTGCTGCCGCTCTCCACATAGACTCTTCCACACTGCACCCCCGCTCTTAGTGTTGTGAGTGGTTCCTCCCTTGTTGTATACTAATGAGTCATGTTCACTCTGTTTGTTGAGAGCAGTACTGTAAATGTAATTTATTGATTGGACAGTTTTGATGACAGTGGATTTATGCAATTTCTCTGATTGTTCTAAACGTATGCTTTTAGGCAGGGTTATACACATCTCGTGGCTGTTTATTTTGAAATATAAATGTGAATGTAAATATTTTGTTACTTCATGCAACAGGGTTGTAATTGATTTAATATTAACTGATTCAATCAAATTGTGTTTATCATTGAAAGACACTAGATGGCACTCTAGGCCATTGTAATACATCACCCATGATGTGCATTGTCATTCTATTGGTCTGCCGCTGTAATAAACTCGACAGGGATCCAAGCTGAGAACAA

Function

symbol description
adap1 Enables GTPase activator activity. Involved in regulation of GTPase activity. Located in cytosol; nucleus; and plasma membrane.

NR:

description
arf-GAP with dual PH domain-containing protein 1-like isoform X3

GO: NA

KEGG:

id description
K23781 ADAP, CENTA; Arf-GAP with dual PH domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575886.2 False 1943 mRNA 0.48 10 16091814 16123048
XM_021575888.2 False 2191 mRNA 0.48 10 16091814 16133094
XM_021575889.2 True 2173 mRNA 0.48 10 16091814 16133094

Neighbor

gene id symbol gene type direction distance location
LOC110498754 NA coding downstream 12655 16024068 ~ 16079159 (-)
LOC110499052 LOC106589217 coding downstream 79805 15918962 ~ 16012009 (-)
LOC110498753 NA coding downstream 176498 15912445 ~ 15915316 (-)
LOC110498752 LOC106589219 coding downstream 184734 15905398 ~ 15907080 (-)
LOC110499050 LOC106589334 coding downstream 333563 15756659 ~ 15758251 (-)
LOC110499056 LOC103024569 coding upstream 2258 16135352 ~ 16140816 (-)
LOC110499060 LOC106589322 coding upstream 414253 16547347 ~ 16560741 (-)
LOC118942476 NA coding upstream 418044 16551138 ~ 16551268 (-)
LOC110498757 LOC106589318 coding upstream 571679 16699815 ~ 16773689 (-)
LOC118942039 NA coding upstream 621139 16754233 ~ 16768854 (-)
G1668606 LOC106589333 non-coding downstream 5944 16084201 ~ 16085870 (-)
G1668553 NA non-coding downstream 16763 16006198 ~ 16075051 (-)
G1668590 NA non-coding downstream 28617 16062873 ~ 16063197 (-)
LOC110498751 LOC106589337 non-coding downstream 452625 15636400 ~ 15680564 (-)
G1667922 NA non-coding downstream 472371 15609714 ~ 15619443 (-)
G1668757 NA non-coding upstream 190039 16323133 ~ 16323396 (-)
G1668759 NA non-coding upstream 191877 16324971 ~ 16325309 (-)
G1668760 NA non-coding upstream 192944 16326038 ~ 16326259 (-)
G1668761 NA non-coding upstream 193800 16326894 ~ 16327113 (-)
G1668762 NA non-coding upstream 194621 16327715 ~ 16327954 (-)
LOC110498749 s39ab other downstream 515123 15421293 ~ 15577049 (-)
G1667916 NA other downstream 676636 15339685 ~ 15415178 (-)
G1667100 LOC106589344 other downstream 1194133 14890375 ~ 14897681 (-)
LOC110499033 LOC107708254 other downstream 1457374 14616546 ~ 14647860 (-)
G1668767 NA other upstream 204182 16337276 ~ 16337734 (-)
G1669343 LOC106589306 other upstream 620932 16754026 ~ 16795255 (-)
G1669974 NA other upstream 1136689 17269783 ~ 17270148 (-)
LOC110498759 NA other upstream 1295521 17428615 ~ 17434040 (-)

Expression


Co-expression Network