Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110499057 |
| gene name | LOC106589330 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 16134445 ~ 16135964 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cytochrome c oxidase assembly protein COX19 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021575892.2 | False | 1142 | mRNA | 0.40 | 3 | 16134445 | 16135964 |
| TU1908864 | True | 920 | TUCP | 0.40 | 3 | 16134470 | 16135767 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499053 | LOC106589333 | coding | upstream | 48537 | 16082734 ~ 16085931 (+) |
| LOC110499051 | LOC106589335 | coding | upstream | 378273 | 15753278 ~ 15756172 (+) |
| LOC110499048 | LOC106589221 | coding | upstream | 497336 | 15630588 ~ 15637109 (+) |
| LOC110499045 | LOC106589339 | coding | upstream | 522405 | 15607645 ~ 15612040 (+) |
| LOC110499046 | LOC106589340 | coding | upstream | 534785 | 15597289 ~ 15599660 (+) |
| LOC110499058 | LOC106589328 | coding | downstream | 4873 | 16140837 ~ 16306628 (+) |
| LOC110499059 | LOC106589326 | coding | downstream | 214012 | 16349976 ~ 16448699 (+) |
| LOC110498755 | LOC106589324 | coding | downstream | 400697 | 16535724 ~ 16540437 (+) |
| LOC110499586 | LOC106589323 | coding | downstream | 404978 | 16540942 ~ 16545004 (+) |
| LOC110499061 | grn | coding | downstream | 424884 | 16560848 ~ 16592647 (+) |
| G1668296 | NA | non-coding | upstream | 58553 | 16075691 ~ 16075892 (+) |
| G1668288 | NA | non-coding | upstream | 71351 | 16062863 ~ 16063094 (+) |
| G1668260 | NA | non-coding | upstream | 117836 | 16015971 ~ 16016609 (+) |
| G1668252 | NA | non-coding | upstream | 122430 | 16005046 ~ 16012015 (+) |
| G1668341 | NA | non-coding | downstream | 3319 | 16139283 ~ 16139686 (+) |
| G1668343 | NA | non-coding | downstream | 4479 | 16140443 ~ 16140720 (+) |
| G1668451 | NA | non-coding | downstream | 185795 | 16321759 ~ 16322088 (+) |
| G1668450 | NA | non-coding | downstream | 186464 | 16322428 ~ 16322843 (+) |
| G1667601 | NA | other | upstream | 793261 | 15339612 ~ 15341184 (+) |
| G1666308 | NA | other | upstream | 1348525 | 14785592 ~ 14785920 (+) |
| G1666194 | NA | other | upstream | 1510231 | 14601321 ~ 14624214 (+) |
| G1665637 | LOC106589364 | other | upstream | 2462444 | 13669172 ~ 13672001 (+) |
| LOC110499000 | hecd2 | other | upstream | 3238702 | 12861668 ~ 12895798 (+) |
| LOC110498756 | LOC106589319 | other | downstream | 522310 | 16657491 ~ 16706241 (+) |
| LOC118941995 | LOC105021261 | other | downstream | 1317523 | 17453487 ~ 17457043 (+) |
| G1670091 | NA | other | downstream | 1436867 | 17572831 ~ 17577262 (+) |
