LOC110499065 (LOC106589305)


Basic Information

Item Value
gene id LOC110499065
gene name LOC106589305
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 16784825 ~ 16789220 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575942.2
AATTCACTATTGACTTTGTGACCTGCTATAATGATGTCAGTTCATTTGCTATTTCCTTCCCAGATAAAACCCTGGCTTGGGGGTTGCCTTATCTGACTtatttacagtacagtgagtaccaTATCTAGGACCTAGTGTTATTGGTAAGTTATCTTCTCAGCATCTCCTGAGTAAGTCCAAAACCATTTAATGATTGATTCCTTTATGTAACCGACCAGGTGGGCTAGCTGCAGGATTCTGGCCAGACTCAATTTTTACAAAGTTGTCAGAAATGTATTATATAACTGACAGATTATGGTCTGCAAGTTGTCGAAGGATGGACGTATTTAGCGTATTGTATATATATTTGCCTTTTTGtaattcaaatgtttttttatttcttatttttttaaatgtgttgttTAAAACTGGCCAAAAAGTGGGCTTAGGGAAGTCTGTGCATTTGTGTGACTCTTTTAGTCCCTATCTTATCCATTACATGGTCTTACAAGGACATCTTACTGTATTACACATAAAGCAGACTGTAGTGTAGTAAAACATTGGGTTTTCATTTCAATAGAGAAAAGCGAATGCAATGCATGTTTTCCACGCATCCCCTTGCTTGGCTTGTTTTGCCACAAATTGTATTGTGGAGGCTATTTGTTGGGTTTTTAATTTGAATTCCACCAGTCAATCATAAATTAAGTATTTTTGGCTCCATTTCAgggtgagagacacagagacactgaTTGACAATTGTTTTTACCTGTCCTTTGTACTTATTTGTATGGCCTCTATCCTTAGTACAACCCTCCCAAACACCCCTGCCCCGCTGTGTTTTATTACACGTGCAAGGTCCAAAGATCAGGCTGTACATGCCTGTGGGTGGTGGGACCCTCGGGTATAAAAACAACAGGCAGACTCATGCATACAGTGCTCTCATACCCCATCACATCTCACATTGGCTTTCTAGACTGACAATTCCCTAGGGACAGTTCGAAAATGGAGGCAGTCATGGATGCCATGCAGGGCTATGGGGTGAGCACCACTAATTACCTTCAGACCAACTATAAGGACGCCCAGGGTTTGTTCCTGTGGGTGTCCTGGGCTGCTGACCTCAGGAACACCTTCTTCATCTTCTTCCCTCTCTGGTTCCACCTGCGGGAGTCAGTGGGCATCAAGCTCATCTGGGTGGCAGTGATCGGCGACTGGCTCAACCTGGTCTTCAAGTGGATTCTGTTTGGCGAGAGGCCGTATTGGTGGGTCCATGAAACACCTTACTACAGCAATACCACTGCACCTCACATTGAACAGTACCCAATGACCTGTGAAACTGGCCCAGGCAGTCCCTCTGGCCACGCTATGGGAGCTGCAGGCGTCTACTACACACTGGTTACTTCCATTCTAGCCATCATGCTGACCAAGAATAAGACGGGATCTTCCTCCAAGGGCCTGTATCTACGGGGCACTCTGTGGGCGTTCTTCTGGGCGGtccaggtctgtgtgtgtctctccagagTCTTCATTGCTGCCCACTTCCCCCACCAAGTCATCTGTGGAGTAATCACAGGTATGGTTGTGGCCGAGGCGTTCAACAGAACCCAGTGGATCTACGGAGCCAGTCTGAAGAAGTACTTCTACACCACCCTCTTTCTGCTCTCCATCGCTGTGGGCTTCTACGTGCTGCTGAAGGCTCTAGGCGTGGACCTGCTATGGACCCTGGAGAAAGCCCAGAAGTGGTGTGTGAGAGCCGAGTGGGTCCACATGGACTCCACTCCCTTCGCCAGCCTCCTGCGTAACATGGGCACCCTGTTTGGCCTGGGCCTGGGCCTGCACTCGCCCCTCTACACCGAGAGCAAGAACATCAGCGGCACGACCCTCTTTAGGACGGGATGTATCGTCAcctcgctgctcctgctgcacctCTTTGACTCCTTCAAGCCCCCCACGCACACTGCCGCTGTCTTCTACCTGCTGTCTTTTTGTAAGAGCGCCACTGTCCCCCTGGCAACCGTCAGCATCATCCCCTACTGCGTGTCTGGAGCTCTGAGCAGCGTACAGAGCAAGAAGTATTTGTGAGGTCGTTGGCGGCCGACATGCACATAGTCTCGTGTATTCGGATATGACTCCAGAATTGAACCGTGCTGTAATCCTTAATCATTCCATGCATTGACTTTCTTCCCAAACTGCCCAAGCGATCAACAAGCCATTGTGGTCTTTGTCTACCCTACTTTCATCCAGTCACCCACCGTAAAGGTCTTATTTTCTTATCTACACACAGTGTGAACACTATGATGAAAGGATTATCCAGTGAATTACTCAGTGGCACTTTAGACACTGTGGTTTGATTGTATCAAAACTGATAATTTATAAGTAGTTCAGTGCAAACTCAGGAGTCCAGAAAGTTAATGTTCCTGTTTTGAAACGAGATAAAGCCAAATTAAATCCAGGAGAAAATGAGCCCAAAAGCTCTCTCAGGGACTTTAGTGGCCTGCTTTACAGTGCGTTCTAAGAATATGTTATACATTAATAACTTTGTTAATATTTGTTTTGTAACTGTATTTTTCctgttttaatatatttttagAAATTCTGTCAGATATTTATAATAAAAATCTTTCAAATATA

Function

NR:

description
glucose-6-phosphatase-like

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0004346 glucose-6-phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575942.2 True 2607 mRNA 0.46 5 16784825 16789220

Neighbor

gene id symbol gene type direction distance location
LOC110499587 LOC106589313 coding downstream 6552 16776151 ~ 16778273 (-)
LOC110498757 LOC106589318 coding downstream 11136 16699815 ~ 16773689 (-)
LOC118942039 NA coding downstream 15971 16754233 ~ 16768854 (-)
LOC110499060 LOC106589322 coding downstream 224084 16547347 ~ 16560741 (-)
LOC118942476 NA coding downstream 233557 16551138 ~ 16551268 (-)
psme3 LOC106589310 coding upstream 16668 16805888 ~ 16813083 (-)
LOC110499077 tmem204 coding upstream 450645 17239865 ~ 17254491 (-)
LOC110499076 LOC106578246 coding upstream 485230 17274450 ~ 17285270 (-)
LOC118942041 LOC106611593 coding upstream 556946 17346166 ~ 17350460 (-)
LOC118942007 LOC106578245 coding upstream 570434 17359654 ~ 17362598 (-)
G1669286 LOC106589319 non-coding downstream 127126 16657389 ~ 16657699 (-)
G1669285 NA non-coding downstream 131770 16652847 ~ 16653055 (-)
G1669280 NA non-coding downstream 139190 16645410 ~ 16645635 (-)
G1669259 NA non-coding downstream 164234 16620374 ~ 16620591 (-)
G1669363 NA non-coding upstream 13617 16802837 ~ 16803038 (-)
G1669365 NA non-coding upstream 15246 16804466 ~ 16804898 (-)
G1669380 NA non-coding upstream 55290 16844510 ~ 16844709 (-)
G1669402 NA non-coding upstream 88218 16877438 ~ 16877824 (-)
G1669405 NA non-coding upstream 90680 16879900 ~ 16880101 (-)
G1668767 NA other downstream 447091 16337276 ~ 16337734 (-)
LOC110498751 LOC106589337 other downstream 1139900 15636400 ~ 15680564 (-)
LOC110498749 s39ab other downstream 1208134 15421293 ~ 15577049 (-)
G1667916 NA other downstream 1369647 15339685 ~ 15415178 (-)
G1669974 NA other upstream 480563 17269783 ~ 17270148 (-)
LOC110498759 NA other upstream 639395 17428615 ~ 17434040 (-)
LOC110498760 stub1 other upstream 653370 17442590 ~ 17452727 (-)
G1670109 LOC105007702 other upstream 807395 17596615 ~ 17625448 (-)
G1670145 NA other upstream 896756 17685976 ~ 17691866 (-)

Expression


Co-expression Network