LOC100135885 (LOC106589306)


Basic Information

Item Value
gene id LOC100135885
gene name LOC106589306
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 16789813 ~ 16795054 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575943.2
CAAATGCCCTAACCTTGAATAAAGTCcagtgggaacaacagactgcaTGACAGTCCTGGAGCTCAAGAGGACCGCTTCTGACCATTCTCCAATCCTCGCCCAGCTTTGGTGTATCTTCCCTGGGGACTGATCTGGATCCACACCACAGTCATGGATCTTTTCCACAGCTGGGGGGTGGAAGTGGCCATCCATCTGCAGACCCAGTATGGGCATTATGAGGGCTGGTTTAGCCTAGCCTCTACAGTGGCTGACCTGCATACCACCTTCTTTTGTTTCTTCCCAGTCTGGTTTCATCTGCGCAGGGACGTGGGTGTAAAGCTCATCTGGGTGGCTGTCATCGGGGACTGGCTCAACCTGGTCATGAAGTGGGTTCTATTTGGAGAGAGACCCTATTGGTGGGTCCATGATACCCGCTTCTATGGGACAGATCCAGCCCCTGCCTTAAAACAATTCCCTATCACCTGTGAAACTGGACCAGGAAGCCCTTCGGGTCATGCCATGGGCTCGTCTGGGGTGTGGTACGTGATGATAACAGCTGTCTTCTCAGTGGCGACAGAAAGGCGGTTCCCCCCTCTCCTGTACAGGTTCTTGCAGGTGGGGCTCTGGATGCTGCTGTGTACAGTAGAGCTGTTGGTGTGCATGTCCAGAGTCTACATGGCTGCCCACTTCCCACACCAGGTCATCAGTGGGGTCATCACAGGTATCATGGTGGCTGAGGCCTTCTCCAGAGTGCAGTGGATCTATGGAGCCAGTCTGAAGAAGTACTTCTACACCACCCTCTTTCTGCTCTCCTTTGCTGTGGGCTTCTACGAGCTACTGAAAGCTATAGGCGTGGACCTGCTGTGGTCCCTGGAGAAAGCCCAGAAGTGGTGTGTGAGAGCCGAGTGGGTCTACATGGACTCCACTCCTTTCGCCAGCCTCCTGCGCAACATGGGCACCCTGTTTGGCCTGGGCCTGGGCCTGCACTCACCCCTCTACACCGAGAACAAGAACAGCAGCATCCCCTTCAGGGTGGGGTGTATCACTGTCTCTTTATTGTTGCTACAGATTTTGGATGGCTTGACGTTCTCCTCGAGAGACCAGGCAATGTTCTATGTGTTGTCATTTAGTAAGAGTGCTGCTGCTCTCTTCATTCCCACAGCTCTGGTTCCCGGAGGACTCTCCTGGATCTTCCCAGGTAGTGGGGCGGCTAAGCTGAAATTTTCATAACAACAGTTCACTTTATGATAAAAGCACCAAATTTTGCAGAGGTAGATTTATGTACCCTGAAATTATTTACATATCAGGCCATGGCAGCCATCTTACAAAATGGCCACTGAAAGTAACACAACATTTTACAATTCAGAAGTAGTGTTTTGATATAACTGCACCAAATGTGTTACAGAGGTATGTACCCTGaaaatatttacagtatatatggaGCCCCCACAGATTTGGCCCCTGGGGCCACAGCAGACATTTTACAAAATGCCAACATATTGTAATACTGTTTAACAATTCGGAATGACTGTTTTGTGATAACAGCACCAAATATGCTACATAGGTACATTGATGTCCCCCGAAAGGATTAAGAAATGGAAACACCACAGATTTGGCCCCTGGGGGCCTCTACGGGGCCATGTCAGTCATTTTACAAAAATCACAACATATTGTAAAATTGTTTTACAATGCAGAAGGACTGTTTTGAGATAACAGCACCACATTTAGTACAGAGGTAGATAGTACAGAGGTACAGTGCTTTCAGAcagtattcatacaccttgatttcttccacatattgttgtgttacagcttaaATTGAAAATggattacatgtatttatttttatctcacacaatacctcataatgacaaagtgaaaacatattttttgtaaatgtttGCCAATgtatatttaggcttgccataacaaaggggttgaactcAAGACCATGTGGTATTGTGTAGGCTAGtgaccaaaaatctcaatttaatcaattttaaattcagtctttgacaaaatgttttgggaaaaatgtcaaggggtgtgagtacttcccgaaggcactgcaTGTCAGGGATGTGCAACTATGATGGGGGTCTGGAGTCATTATGAGGGGCTGCAGTGGCTCgtgggtctgcgtacccacacaTCCACACTGTGGCGGAGAGAAGATTTTGCAGTTGTAGAGCGCATTTCAAgcaattctaaacattttgccatagggtggaggcaaatgtttgcagtttttaatttGATGACTTATGATCAATGGGCCTCACCCTGGTCGGTAATTGCTTACTACAAGTTCAGATAGCTAGACTAATTtagctagactaatttaccaatgaCATGAGCTAATTAAgagactgctgatgcacaactaAATTCCAAAATTGAACCTTGTATTGTATTATTCTAACTCTTAGTTGAGACCCTGAccgagtcccccccccccaccctgatTTTAAATTGGTCCACGGGCCGTATGCATCCCGCGGGCCACCAGTTGCCTATCCCTGTAGATGCTGCAGTGTAGCTTCTGATGGAATCCTATACATTCAAGACTTATAGATGGATATGGTTATGCACAGGTGGTGAATATGATCAAGCATCTAAAAAGTTTGTAATATGGCAGGTAACCTGGTTGATTTGAAGAAGTTAAAGTGTTTGACAATTTTTGTGTTTTGTATTTACTAGATATTGTGAACAAGTTTGCAGAGATGAATTAGTGAGTAAAATCAGACAGAGGTGTTTATACTTTTGAGTTTGATTGTTCTTCCGAGAAAGCTTCGGTCCAGCTTTTCTTCTCTGTGTCTTGTTTTTCCAAAATGCCAATGCTGATTAAATTTTCACCAGAGCCAGGCATTAAACATTAA

Function

NR:

description
glucose-6-phosphatase

GO:

id name namespace
GO:0006094 gluconeogenesis biological_process
GO:0016311 dephosphorylation biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004346 glucose-6-phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575943.2 True 2858 mRNA 0.45 5 16789813 16795054

Neighbor

gene id symbol gene type direction distance location
LOC110498756 LOC106589319 coding upstream 83572 16657491 ~ 16706241 (+)
grb7 LOC106589320 coding upstream 152643 16621771 ~ 16637170 (+)
LOC110499062 arf1l coding upstream 178597 16605051 ~ 16611216 (+)
LOC110499061 grn coding upstream 197166 16560848 ~ 16592647 (+)
LOC110499586 LOC106589323 coding upstream 244809 16540942 ~ 16545004 (+)
LOC110499066 LOC106589302 coding downstream 18060 16813114 ~ 16822670 (+)
LOC110499069 LOC106589311 coding downstream 29432 16824486 ~ 16840335 (+)
LOC110499071 arl4d coding downstream 52396 16847450 ~ 16849896 (+)
LOC110499072 sost coding downstream 82397 16877451 ~ 16920896 (+)
LOC118942005 LOC106589179 coding downstream 206660 17001714 ~ 17006377 (+)
G1668937 NA non-coding upstream 135717 16653791 ~ 16654096 (+)
G1668936 NA non-coding upstream 137238 16652361 ~ 16652575 (+)
G1668935 NA non-coding upstream 141358 16648224 ~ 16648455 (+)
G1668930 NA non-coding upstream 150886 16638537 ~ 16638927 (+)
G1669019 NA non-coding downstream 1101 16796155 ~ 16797220 (+)
G1669022 NA non-coding downstream 6499 16801553 ~ 16801752 (+)
G1669029 NA non-coding downstream 49199 16844253 ~ 16844591 (+)
G1669054 LOC100194703 non-coding downstream 85218 16880272 ~ 16880602 (+)
LOC110498755 LOC106589324 other upstream 249376 16535724 ~ 16540437 (+)
LOC110499058 LOC106589328 other upstream 483592 16140837 ~ 16306628 (+)
LOC110499057 LOC106589330 other upstream 654046 16134445 ~ 16135964 (+)
G1667601 NA other upstream 1448629 15339612 ~ 15341184 (+)
LOC118941995 LOC105021261 other downstream 658433 17453487 ~ 17457043 (+)
G1670091 NA other downstream 777777 17572831 ~ 17577262 (+)
G1670125 LOC105007702 other downstream 921982 17717036 ~ 17812707 (+)
G1670129 NA other downstream 957240 17752294 ~ 17760812 (+)
G1670126 NA other downstream 972427 17767481 ~ 17773702 (+)

Expression


Co-expression Network