LOC110499069 (LOC106589311)


Basic Information

Item Value
gene id LOC110499069
gene name LOC106589311
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 16824486 ~ 16840335 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575946.2
CCTCAAGTAGGAAGTGATTACTTCACTTCGCAAGTTTATATAAACGATGTAGGAGATGTGTCCAACATTCGTTACTCCTTGACTGATATAAAACATGCTAGGCTGAGAGTATTTACCTAATCAACAATTAGCAGCACTGCAAACCTGCAGGACATAATTTTATACGATCGGATGGTGTTTCGACTATGGTTACTTTAGAACACTCCAGTGGCTCCAAGGATGATACAGAGGCCATCCTGCCTCAGGAACAAGAACCGGAGAAGAGAAGACTTCAGTCCCACTCCCAACTATATGGAGCCATCACCGGGAACAGTACAGGCAACCTAGGAGATACCTGCCCGACTTGTTGGGGAGTAGGGCGTATTCCAAGAGGACATGATCAGCTAGTGGCAGTCATCCCATGTTCAGACATTAGACTGAGGCCCAGCCGgacAAAACTCTATGTGTGTATTTCAGTGGTGGTGTGTCTCCTGATCTGCTGTCtgatcctcttcttcctcttcccacGGAGTATCTCACTGTCCCTTGTCACCGTCAAATCAGTGATGGTCTTCTTCACCCCACAAACAGTTGAAATGCAAATCATGAATGTCTTTAACGTCACCAATGAGAACTTTGCGGACATTCAATTCTTGGAATTTGATATACAAGTGCTGATTGCTGAAACAGTGGTTGGCAGGATCAAGATATCTAATATGACGGCGGTCAAATCACGTTCAGAGAAAGCGtatactgttgtcATACCCATAACAATTGAGGACCCAGGCCTGAATAATTACTGCAAGTCAAACACCATAAGGATTCACACCTTGTTCTTGCATTTGCAAATGACAATGAACATTTCCTACTTGGCTCACTCGGAGCAGCTGTCCGAAGACACCTTTGAGTACATTGACTGTGGAGCCAACACCACCACTCCCCACCCTATCGGGCAAATTATTTTTGAAAGATGAAAGCCTGTCAATGAGGAATCCCCAAAGTGAAAAGGTTTATTATGAACAAGATAGACTCTAAGGAATAGGGGCCTCTTCCATTCTATCTTATGTCCAGCGGTCATAAAAAATATATTGCTAAATGTTTCGTTGTCAAAGGGAAATGTATACATATAGTATTGTAGTAGACTATAGTATTGTCCTATGCTCTGTTCACGTTATTTTCTTTGCAATATTCTTCTGAGGTCGTTTTTTTAATGATTTATGAACTGTGAAAGTACATGTTGGTGTAATTGTAACATAATTGTAGGGATTtaaaacatacactgagtgtacaagcCATTAGGAAccccttcctaatattgacttgcaccccccttttccctcagaacagcctcaacttgtcggggcatagactctacaaggtgtcggcccatgttgactccagtgcttcccacagttgtgtcaagttggctggatgtgctttgggtggtggaccattcttgatacacacgggaaattgTTGcgtgtgaaaaacacagcagcgttacagttcttgacacactcaaactgatgctcctggcccctactaccataccccattcaaaggcactgaaatgtgtctttcccaTTCACACTCTGAAAGGCATACATactcaatccatgtctcaattgtctcaaagcttaataatccttctttaaccggtctcctccccttcatctacactgattgaagtgggttgaacaagtgacatcaataacagatcagagctttcacctggattcacctggtcagaatatgtcaagaaaagagcgggtgttactaatgttttttacactcagtgtagatttcATCATTAAAAGTCAATCAGTGTATATGAGATATATGATCATGATTTATAATACAAATTAAATCCGTTAATTAAGCTA

Function

NR:

description
transmembrane protein 106B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575946.2 True 1862 mRNA 0.42 8 16824486 16840335

Neighbor

gene id symbol gene type direction distance location
LOC110499066 LOC106589302 coding upstream 1816 16813114 ~ 16822670 (+)
LOC100135885 LOC106589306 coding upstream 29432 16789813 ~ 16795054 (+)
LOC110498756 LOC106589319 coding upstream 118245 16657491 ~ 16706241 (+)
grb7 LOC106589320 coding upstream 187316 16621771 ~ 16637170 (+)
LOC110499062 arf1l coding upstream 213270 16605051 ~ 16611216 (+)
LOC110499071 arl4d coding downstream 7115 16847450 ~ 16849896 (+)
LOC110499072 sost coding downstream 37116 16877451 ~ 16920896 (+)
LOC118942005 LOC106589179 coding downstream 161379 17001714 ~ 17006377 (+)
LOC110499073 LOC106578252 coding downstream 211827 17052162 ~ 17176942 (+)
telo2 telo2 coding downstream 347388 17187723 ~ 17204657 (+)
G1669022 NA non-coding upstream 22734 16801553 ~ 16801752 (+)
G1669019 NA non-coding upstream 27266 16796155 ~ 16797220 (+)
G1668937 NA non-coding upstream 170390 16653791 ~ 16654096 (+)
G1668936 NA non-coding upstream 171911 16652361 ~ 16652575 (+)
G1669029 NA non-coding downstream 3918 16844253 ~ 16844591 (+)
G1669054 LOC100194703 non-coding downstream 39937 16880272 ~ 16880602 (+)
G1669056 NA non-coding downstream 41593 16881928 ~ 16882141 (+)
G1669061 NA non-coding downstream 44551 16884886 ~ 16885119 (+)
LOC110498755 LOC106589324 other upstream 284049 16535724 ~ 16540437 (+)
LOC110499058 LOC106589328 other upstream 518265 16140837 ~ 16306628 (+)
LOC110499057 LOC106589330 other upstream 688719 16134445 ~ 16135964 (+)
G1667601 NA other upstream 1483302 15339612 ~ 15341184 (+)
LOC118941995 LOC105021261 other downstream 613152 17453487 ~ 17457043 (+)
G1670091 NA other downstream 732496 17572831 ~ 17577262 (+)
G1670125 LOC105007702 other downstream 876701 17717036 ~ 17812707 (+)
G1670129 NA other downstream 911959 17752294 ~ 17760812 (+)
G1670126 NA other downstream 927146 17767481 ~ 17773702 (+)

Expression


Co-expression Network