Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118942006 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 17317362 ~ 17318094 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037875.1 | False | 396 | mRNA | 0.50 | 3 | 17317362 | 17318094 |
| TU1910371 | True | 206 | lncRNA | 0.36 | 1 | 17317734 | 17317939 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942040 | ift140 | coding | upstream | 97498 | 17205286 ~ 17219864 (+) |
| telo2 | telo2 | coding | upstream | 112705 | 17187723 ~ 17204657 (+) |
| LOC110499073 | LOC106578252 | coding | upstream | 140420 | 17052162 ~ 17176942 (+) |
| LOC118942005 | LOC106589179 | coding | upstream | 310985 | 17001714 ~ 17006377 (+) |
| LOC110499072 | sost | coding | upstream | 396466 | 16877451 ~ 16920896 (+) |
| LOC118941995 | LOC105021261 | coding | downstream | 135435 | 17453487 ~ 17457043 (+) |
| LOC118942008 | LOC105021261 | coding | downstream | 143343 | 17461437 ~ 17464981 (+) |
| LOC110515779 | LOC105021261 | coding | downstream | 151275 | 17469369 ~ 17472887 (+) |
| LOC118941996 | LOC105021261 | coding | downstream | 158319 | 17476413 ~ 17479931 (+) |
| LOC118942042 | LOC105021261 | coding | downstream | 166230 | 17484324 ~ 17495741 (+) |
| G1669726 | NA | non-coding | upstream | 8463 | 17308681 ~ 17308899 (+) |
| G1669723 | NA | non-coding | upstream | 14556 | 17302478 ~ 17302806 (+) |
| G1669719 | NA | non-coding | upstream | 17611 | 17299520 ~ 17299751 (+) |
| G1669702 | NA | non-coding | upstream | 42414 | 17274727 ~ 17274948 (+) |
| G1669701 | NA | non-coding | upstream | 43879 | 17273191 ~ 17273483 (+) |
| G1669683 | NA | non-coding | downstream | 10426 | 17328520 ~ 17386920 (+) |
| G1669755 | NA | non-coding | downstream | 41702 | 17359796 ~ 17367687 (+) |
| G1670085 | NA | non-coding | downstream | 224119 | 17542213 ~ 17542468 (+) |
| G1670086 | NA | non-coding | downstream | 238961 | 17557055 ~ 17561682 (+) |
| G1670088 | NA | non-coding | downstream | 253288 | 17571382 ~ 17571653 (+) |
| LOC110498756 | LOC106589319 | other | upstream | 631267 | 16657491 ~ 16706241 (+) |
| LOC110498755 | LOC106589324 | other | upstream | 776925 | 16535724 ~ 16540437 (+) |
| LOC110499058 | LOC106589328 | other | upstream | 1011141 | 16140837 ~ 16306628 (+) |
| LOC110499057 | LOC106589330 | other | upstream | 1181595 | 16134445 ~ 16135964 (+) |
| G1667601 | NA | other | upstream | 1976178 | 15339612 ~ 15341184 (+) |
| G1670091 | NA | other | downstream | 254737 | 17572831 ~ 17577262 (+) |
| G1670125 | LOC105007702 | other | downstream | 398942 | 17717036 ~ 17812707 (+) |
| G1670129 | NA | other | downstream | 434200 | 17752294 ~ 17760812 (+) |
| G1670126 | NA | other | downstream | 449387 | 17767481 ~ 17773702 (+) |
