LOC110499149 (LOC106589267)


Basic Information

Item Value
gene id LOC110499149
gene name LOC106589267
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 19295123 ~ 19303669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576095.2
GTATACAGTAACGACGTTACAACCCGGAAAGAATACCCTCTTCTGTTAACGTTTGAATAAACAAGAATGACCCATTTGTTTTAGGAAAAGATTGCAAGCGACGTGTCAAACATATATAGTTTATTTCAACTAAGTAATATCGATGTCTCGTTTAGGGTATTTATGTTTGGAATTTATCGAATGTGTGTAGCAACGCCCTAATGCCAGCCACCTTGTTGGGGAAAAAGAGCCCCGTTGTGTTTACAAATCGATAAGCATTATTGTTACCCTGAAGTGTAATAATAGTGGTGTTTTTTGACGAAGAAAATATGGCCGAATTGCATGTTGTGGAGCAGAGTGTTACTGCCACAATAGAACAAACCGAGCACCGTGATGTCCGAGGCTCTGTTCGGCTGGCTGCTTCGCCCACTCTCATGGTTTCACCGCGGAGTAGCTTGCCTACCAGTCCTGGGGTGTCGAGTACTAGTAGAGCGGTGTTTGGGTTCCCAATGAAGAGCAACCTCAGTTCCCCATCGGAGCAAGCCGAGAAGCCAGAATCCCGCTGGGTTTGCCTAAATGTCGGTGGAACCTATTTTGTCACAACCAAACAGACATTGTGCAGGGACCCCAAATCGTTCCTGTACCGATTGTGTCAAGAAGATCCGGATTTGGACTCTGACAAGGATGAGACGGGTGCTTACCTAATCGACAGGGACCCCACATACTTTGGCCCCATTCTGAATTACCTGCGGCATGGGAAACTGATCATGGACAAGAACCTGGCAGAGGAAGGTGTCCTTGAGGAGGCAGAGTTCTACAATATTGCATCACTAGTAAGGCTGGTCAAGGAGAGGATACGGGACAACGAGAACAGGACATCTCAGGGCCCAGTGAAGCATGTGTACCGGGTGCTGCAGTGCCAAGAGGAGGAACTCACCCAGATGGTGTCCACAATGTCAGATGGCTGGAAGTTTGAGCAGCTCATAAGCATCGGCTCGTCCTATAACTATGGCAATGAGGACCAGGCTGAATTCCTGTGTGTGGTTTCCCGGGAGCTCAACAACTCCACTAACGGCATTGTTATCGAGCCCACTGAGAAGGCCAAGATCCTCCAGGAGAGAGGTTCACGGATGTAAAGAGACTCCCAGGCCTGAGCTCACCCTTCTCAGCTCATGTGACATTTCCAGACGTCTCCTGCACCACCTCAGCCATGGTTCATATCTTTACCCCTTCCACCACCAGCCCGACTCCTCCtttcacctctccctcctcttggtgtgcctttccacagtggggggggggggttcccatCCTCCTCGCCTACAGTGCTACAACATAACCCCATTGCCATTTCTTATTCTCAGTTATATTCGTGTGAACATTTTGAGGGATTCTGAAGAGATGACAATAGAGTATTTATTATTAAATGTAATACTTTTTGTCATAAGTTTGATTTTGAAGATTCCGGTTTTGCCCCTGATCATAGCCCCCATCTTGTCCATAGTACATCCACACAGAGCTAAATCATTGTCACTGTCCTCATTCAGGTGATCACACAGCTAATGGGGAGGCGTTTCCTTTTCTGTCTGGCTTTGTTGACTTGGTGGAaatctcctcaggactttaaaagGACAAAAAAAGAAAGCCGAAAAATCTACTGACTGTGACCTGCCCCCTTCTACAACCCTGAAGATTCACCTATTGGGTGAGAGGATGCTGTAAGCAACATAGCTCACCCTCTGACCTCCACTCCTAGTCCTTACATCTCCACAGCTGGAGCGCTAAGACAGTTCATAGTTGCTTGGGAGGCTGAAAGCCGAGAGGTGGGGCTAAGGACAGAGAAGTAAGTCACAGGAATATTCTACAGCCctcaaattcaaatctggacctcaaagccagttctactgcttttttttgtttttcttcccCTCTAATCGTGGACTGATTTTtaacctgggacaccaggtgggtgcaattaataatcaggtagaacagaaagccAGCAGTAGTCCGGACCTCGTTGGGTAAAATTTGAACACCCCTGTTCTACAGCATCTCTCTTTTGGTCTTCTTGTGCAGTCAGTCCTGGTCTCACAGCAACTCTTGCCCAATAAGACCAGACGATAGTGGGGAGATACAGACCCTTGTCTAACAGAGGCTCCACCCCACCGTAGTTCATCAGTGACTTCCACTGCTGAGCATCCATCAcacacattttatttttggcTCGGGTCAAAGTCCTTTCTCACCAGGAGGGCACATATTTTCTTACAGCCGTACTAAGGATGTTTCCGTGCAAAAGAAAACACACAACTTAAAAGactaaaccacacacacatgtacacaattGTCAGGCATGTGAGgaatataaatctatatataatGAAATtatatggagaaaaaaaatgaatgcAAATGATGTAGTTATTCATTTCTGTTTCATAGTTGTTATATTTGTGTAGTATGGTGAGTTCTATTCCGTTGAGCGAGGAAATATCACTCCTAAACCAATTTTCCTGAGGTGTTTCCCCCAATGACAAAGGTGTACGTTTGTGTATGTAGTGCCTCTGCTATTCATCAATTATTAAAATTATGATCAGCGACCCCGTTTTTCAGCGACACAACTTCTaagtagattttttttgttaCCTATAACCCTTTCAAATGATCCTTCTCGCAGATATACTATTATGTTCTCTTGCATATCTTAGAATTGTAATCGGAGATTAAAGAGACGGGTTATTGAATAAGCTTTTATTTGACATCGAAAGATGGTATGTGTCCTATACAGTGGTCTTGTGACCCTGTTGGACTTGTATCCATCTGTATGATGCCTCAAAGCCTAGGGCCCCTTTTCCCTCTGGCAATGCCTCTGGCATTTAATTTTCATGCCAAATGCCACTCACTCTGCATTTGCCTGTTACACACCTTGGTGTACATTCAGTTAACAGCTTTGCTTAACATTTTGCAGTATTTACTGTGTTAATTCTAGAGTATGCTGAAAGGAATGTTTTAAATGCATACGTTTGGATCTTTTTATAGAGTAGACGTAACCACAGGAACATTGGGTACTGAAAATTCTGCATGGATGTGACTTCAGCTTTCGATTTGTTACATTGGGGGAAAATAAGGAAATTATACCTTGTTTCTCACAGTGTCACATCCCTCTGTGCCAACCAACAGTGATGGGTACCTAGCTTGTCTGGAGTATACCTCTTATTATTCACATATCATTGTCCCAGGAGTAAATCCTGGCATTACCCCATTTGTAATACTTCTGAAAAGTTCAATTTATTCGGTCAATCTGACTGTGTACTTAAAAGAAGTACCCCACAGGTAACCAATATCACATCATTTTTGTTTTACTGGCGTCACAAAATCCATACACCTTTTCCTGTGTATAATGAATATTTGGTGCAATTATGTTATATCAGCATGATTTAAGAATGCGTTCGGCTTAAAACACACAAATAATTACCTGTGCTGTTGTCATGCTCCATGACTGTTTTATCAGACTCTAGAGCTCTGACAATGTTGCTATGACTTTTATTTCTCCTCTTGGAGTGGATGTTGTGCAATTCTACTACGAAACTGGGACAAAAGTGCAGTAGTGCACAGACTGTGCTGCTAGAAGAATGCCTGACTGTCTGATAGAGAGACACCTTCTCCTCTTTGGGCCTTTTTCAAAGCTCCCAGAGGTTGTTCTATTTCCCTTTGTCGTGTCCAGTGTTGTGCCTTTGACCTGTGTTGTGCACAGTTGTCCCCCCCTCCCCCGTGGTTTATGAGGCTCATATCGGAAATGAAAATCTACAAGACACAGAGGGACTCGCATTGAGTGGTCCTCGGTTGGTTCAATCTCCCATTATTAGTCAGTGAGAGGAAAAAGCCCCCTGGAATAGACCTTTACGAGTCTATTCTGTCGTCAAGACTAAGGCCTGTTTGTTCATGTATAATGCAGATTATCAAACTTAACTCCTTTTCTTTTAATGCCAATACTTTTGAACCAAGCCTCCCGTATTGACCCCTGTAGCTCCTGAACCTTTGCCTGTCGCTGCATTCTTCCGGTTTTCTTTCCTGAAATGTGTGTAGACTGTAGGTGTGGTTGGCTTTGTAAGTTTATCCCACAACCGAGGCAGAGAAAAGGAGACCGTAGTTGTAATCAAAGCAGTGCCCCAGTATATCTTAGTAAAAACCAGCAGTGCTTTTTTCTTTTGGAAAAACGGCGACTGCATAAGCCACGTTTATTTGGCTTTCTCTCTTGAATTGCATGTTTAAGGCAATTTATGCTGTTTATTTTGATGCCATGATAACTATACTGACAGTTGTTTTACTGTATTGTTTGCATTCACTTTTGAAGCACTTATTTTTACGTTCAGTGTACCCAAATGTCTCCTTTTGacatttatttgttttgtttatacTTGCAGATTGATTCATCCGATTTTGAAAGGGAACTTTTTATTCGGATAAAAACGATCATTGCAAAAAAAGAAAGTGTTCCCCCATCACTGTACTATTCAGATATTTGTGCAATTTTAACAAATCTGCAAAAAAATACTCTCATTCTGGCACGTAAAAACATGAGAGCATGCATTGTACTAGAGATTGTTATGTACTGGAATTTGTCTGACCTCTGTGTTAGTGCAAGTGTATTTGGTGCATGGTTGGAGAGCATAGGGAAGGCATGGCTCTGTGTTAGGTGTAGATTTTTTGTGTGGAACAGTGGGTCTGCAACTAGAAGTATTCTCTAATCATGCTTTGTTTTTATGTTGTTTTTGTATCCTGTCATGTCAATTTAACAGTAGGtctagctaaaaaaaaaaaaaaa

Function

NR:

description
BTB/POZ domain-containing protein KCTD5-like

GO:

id name namespace
GO:0051260 protein homooligomerization biological_process

KEGG:

id description
K21914 KCTD2_5_17; BTB/POZ domain-containing protein KCTD2/5/17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576095.2 True 4807 mRNA 0.43 6 19295123 19303669
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110499151 LOC106589264 coding upstream 52428 19207252 ~ 19242695 (+)
LOC110499153 LOC106589263 coding upstream 93428 19094882 ~ 19201695 (+)
LOC118942046 NA coding upstream 1452033 17838093 ~ 17843090 (+)
LOC118942045 NA coding upstream 1679673 17607281 ~ 17615450 (+)
LOC118942044 NA coding upstream 1689957 17600129 ~ 17605166 (+)
LOC110499145 LOC106589268 coding downstream 7701 19311370 ~ 19350990 (+)
LOC118942048 NA coding downstream 72570 19376239 ~ 19378591 (+)
LOC110499141 LOC106589274 coding downstream 265303 19568972 ~ 19583925 (+)
LOC110499137 LOC106589279 coding downstream 350478 19654147 ~ 19660703 (+)
LOC110499134 gip coding downstream 371508 19675177 ~ 19676923 (+)
G1670521 NA non-coding upstream 36971 19257917 ~ 19258152 (+)
G1670482 NA non-coding upstream 143290 19151545 ~ 19151833 (+)
G1670470 NA non-coding upstream 157557 19137353 ~ 19137566 (+)
G1670375 NA non-coding upstream 242446 19052605 ~ 19052677 (+)
G1670560 NA non-coding downstream 76640 19380309 ~ 19440638 (+)
G1670526 NA non-coding downstream 85600 19389269 ~ 19397202 (+)
G1670694 NA non-coding downstream 253307 19556976 ~ 19557280 (+)
G1670705 NA non-coding downstream 261984 19565653 ~ 19565940 (+)
G1670747 NA non-coding downstream 340947 19644616 ~ 19644835 (+)
G1670209 LOC105007702 other upstream 1173956 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 1515749 17717036 ~ 17812707 (+)
G1671091 NA other downstream 924126 20227795 ~ 20228168 (+)
G1672918 NA other downstream 1785734 21089403 ~ 21089830 (+)
G1672973 NA other downstream 1836856 21140525 ~ 21191078 (+)
G1673044 NA other downstream 1992703 21296372 ~ 21296854 (+)
G1673063 NA other downstream 2013129 21316798 ~ 21317412 (+)

Expression

LOC110499149(LOC106589267) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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LOC110499149(LOC106589267) Expression in each Bioproject

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LOC110499149(LOC106589267) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network