LOC118942048


Basic Information

Item Value
gene id LOC118942048
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 19376239 ~ 19378591 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037953.1
CAGAACACAGCACTATTTATAACATTTATTTAAGGAAAAAATTGAGAAGGGCTTGCCAGGGTGTTACGTGGAGACCGCGGGGCTGCAAGAGGAAGTCAAGTGTCTATGACAGTTTAACCCTGCACATGCAGGAGGACAGATTGTCTATGGAACTATGGAGAACAGACCCGTGACATTCTGTGGCTTCCCATGAGACAACTTGGTGAGAAAGTCACAAACTTGGATGCATTACCAATAACTTAGAGGCTAAGGTAGTTGACCCTGGCTCTGGAGAGCTCAAGCCTCTCCAGGGACTACTGTATGATGCTGGAGTACTGGGAAGGCCGTTGCCAAGACAGACGAGTGCATCACCAAAGAATCAAGGCCATTGTGTTGAGCTCAATTGTACCAACATTTTTGCAGAACCCGTTGGACCAATGTTATGTTTTAGCAGGCACAGGTTAACAGGAAAGGGAGGCCATGTACAGCAAAGTGCCTTACACAGCACCGTCAGCTAAACACTGACAGCCAAATGATTTTGCACTATTTTTAGGACCAACCCTGATTATCTTGTGACAGCCTTGAAAATCACCTCATCAATCTGTGACTGTGACAAGCTGCTTTTTACACCAAATAAAGGTTTTACACTTTTTTAGCCATGTTACCAAATCTCTAGGGACCAAGAGTTGAGAGTTGAAGGACCTCTACCTGCctttttacagtgcattcggaaagtattcagaccctttcactttCTCCTAATGCtaatcttattctaaaatgtattaaatcgtttttttctacacacaataccccataatgacaaagcaaa
>XR_005037954.1
GAGAAGGGCTTGCCAGGGTGTTACGTGGAGACCGCGGGGCTGCAAGAGGAAGTCAAGTGTCTATGACAGTTTAACCCTGCACATGCAGGAGGACAGGTCGGGATCTTCCACTGACCATAATTGTCTATGGAACTATGGAGAACAGACCCGTGACATTCTGTGGCTTCCCATGAGACAACTTGGTGAGAAAGTCACAAACTTGGATGCATTACCAATAACTTAGAGGCTAAGGTAGTTGACCCTGGCTCTGGAGAGCTCAAGCCTCTCCAGGGACTACTGTATGATGCTGGAGTACTGGGAAGGCCGTTGCCAAGACAGACGAGTGCATCACCAAAGAATCAAGGCCATTGTGTTGAGCTCAATTGTACCAACATTTTTGCAGAACCCGTTGGACCAATGTTATGTTTTAGCAGGCACAGGTTAACAGGAAAGGGAGGCCATGTACAGCAAAGTGCCTTACACAGCACCGTCAGCTAAACACTGACAGCCAAATGATTTTGCACTATTTTTAGGACCAACCCTGATTATCTTGTGACAGCCTTGAAAATCACCTCATCAATCTGTGACTGTGACAAGCTGCTTTTTACACCAAATAAAGGTTTTACACTTTTTTAGCCATGTTACCAAATCTCTAGGGACCAAGAGTTGAGAGTTGAAGGACCTCTACCTGCctttttacagtgcattcggaaagtattcagaccctttcactttCTCCTAATGCtaatcttattctaaaatgtattaaatcgtttttttctacacacaataccccataatgacaaagcaaa

Function

NR:

description
PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037953.1 False 811 mRNA 0.43 3 19376239 19378591
XR_005037954.1 True 791 mRNA 0.45 3 19376282 19378591

Neighbor

gene id symbol gene type direction distance location
LOC110499145 LOC106589268 coding upstream 25249 19311370 ~ 19350990 (+)
LOC110499149 LOC106589267 coding upstream 72570 19295123 ~ 19303669 (+)
LOC110499151 LOC106589264 coding upstream 133544 19207252 ~ 19242695 (+)
LOC110499153 LOC106589263 coding upstream 174544 19094882 ~ 19201695 (+)
LOC118942046 NA coding upstream 1533149 17838093 ~ 17843090 (+)
LOC110499141 LOC106589274 coding downstream 190381 19568972 ~ 19583925 (+)
LOC110499137 LOC106589279 coding downstream 275556 19654147 ~ 19660703 (+)
LOC110499134 gip coding downstream 296586 19675177 ~ 19676923 (+)
LOC110499133 snf8 coding downstream 306817 19685408 ~ 19696205 (+)
LOC110499131 NA coding downstream 333916 19712507 ~ 19718036 (+)
G1670521 NA non-coding upstream 118087 19257917 ~ 19258152 (+)
G1670482 NA non-coding upstream 224406 19151545 ~ 19151833 (+)
G1670470 NA non-coding upstream 238673 19137353 ~ 19137566 (+)
G1670375 NA non-coding upstream 323562 19052605 ~ 19052677 (+)
G1670560 NA non-coding downstream 1718 19380309 ~ 19440638 (+)
G1670526 NA non-coding downstream 10678 19389269 ~ 19397202 (+)
G1670694 NA non-coding downstream 178385 19556976 ~ 19557280 (+)
G1670705 NA non-coding downstream 187062 19565653 ~ 19565940 (+)
G1670747 NA non-coding downstream 266025 19644616 ~ 19644835 (+)
G1670209 LOC105007702 other upstream 1255072 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 1596865 17717036 ~ 17812707 (+)
G1671091 NA other downstream 849204 20227795 ~ 20228168 (+)
G1672918 NA other downstream 1710812 21089403 ~ 21089830 (+)
G1672973 NA other downstream 1761934 21140525 ~ 21191078 (+)
G1673044 NA other downstream 1917781 21296372 ~ 21296854 (+)
G1673063 NA other downstream 1938207 21316798 ~ 21317412 (+)

Expression


Co-expression Network