Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110498769 |
| gene name | LOC106589273 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 19438591 ~ 19555924 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: rho GTPase-activating protein 44-like isoform X6 |
| id | description |
|---|---|
| K21067 | ARHGAP44, RICH2; Rho GTPase-activating protein 44 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036955934.1 | False | 4500 | mRNA | 0.48 | 21 | 19438591 | 19555924 |
| XM_036955935.1 | False | 4479 | mRNA | 0.48 | 20 | 19438591 | 19555924 |
| XM_036955936.1 | True | 2636 | mRNA | 0.54 | 22 | 19440507 | 19555924 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499142 | LOC106589272 | coding | downstream | 15646 | 19401489 ~ 19422945 (-) |
| LOC110499144 | LOC106589269 | coding | downstream | 62359 | 19361616 ~ 19376232 (-) |
| LOC110499146 | NA | coding | downstream | 126290 | 19305650 ~ 19312301 (-) |
| LOC110499150 | NA | coding | downstream | 132992 | 19304115 ~ 19305599 (-) |
| LOC110499147 | LOC106589265 | coding | downstream | 143642 | 19277271 ~ 19294949 (-) |
| LOC110499140 | LOC106589275 | coding | upstream | 28960 | 19584884 ~ 19613597 (-) |
| LOC110499139 | NA | coding | upstream | 58618 | 19614542 ~ 19640508 (-) |
| LOC110499136 | LOC106589278 | coding | upstream | 106633 | 19662557 ~ 19670039 (-) |
| LOC110499132 | calcoco2 | coding | upstream | 140311 | 19696235 ~ 19706467 (-) |
| LOC118942049 | NA | coding | upstream | 287182 | 19843106 ~ 19846496 (-) |
| G1671856 | NA | non-coding | downstream | 41555 | 19383990 ~ 19397036 (-) |
| G1671877 | NA | non-coding | downstream | 103660 | 19333404 ~ 19334931 (-) |
| G1671848 | NA | non-coding | downstream | 134494 | 19299958 ~ 19304097 (-) |
| G1671831 | NA | non-coding | downstream | 181739 | 19256463 ~ 19256852 (-) |
| G1671830 | NA | non-coding | downstream | 183118 | 19255051 ~ 19255473 (-) |
| G1672002 | NA | non-coding | upstream | 90936 | 19646860 ~ 19647148 (-) |
| G1672003 | NA | non-coding | upstream | 91274 | 19647198 ~ 19647493 (-) |
| G1672004 | NA | non-coding | upstream | 91916 | 19647840 ~ 19648067 (-) |
| G1672006 | NA | non-coding | upstream | 93097 | 19649021 ~ 19649230 (-) |
| G1672023 | NA | non-coding | upstream | 128027 | 19683951 ~ 19684278 (-) |
| G1671895 | LOC107575789 | other | downstream | 3550 | 19432139 ~ 19435041 (-) |
| G1671859 | LOC106589268 | other | downstream | 31660 | 19326814 ~ 19406931 (-) |
| LOC110499154 | LOC106589262 | other | downstream | 365404 | 19054126 ~ 19095333 (-) |
| G1671580 | NA | other | downstream | 795707 | 18594053 ~ 18642884 (-) |
| G1671584 | NA | other | downstream | 806504 | 18631507 ~ 18632087 (-) |
| G1672381 | LOC106589294 | other | upstream | 693535 | 20249459 ~ 20251165 (-) |
| G1672588 | NA | other | upstream | 1064818 | 20620742 ~ 20670417 (-) |
| G1672649 | dhx8 | other | upstream | 1173351 | 20729275 ~ 20730072 (-) |
| phf5a | LOC102780084 | other | upstream | 2033105 | 21589006 ~ 21596518 (-) |
| G1673740 | LOC106589538 | other | upstream | 2280409 | 21836333 ~ 21844793 (-) |
