trnal-uag-53


Basic Information

Item Value
gene id trnal-uag-53
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 21228523 ~ 21228604 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnal-uag-53
GGTAGcgtggccgagtggtctaaggcgctggatttaggctccagtcatTTCGATGGCGTGGGTTCGAATCCCACCGCTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-uag-53 True 82 mRNA 0.60 1 21228523 21228604

Neighbor

gene id symbol gene type direction distance location
LOC110499107 LOC106578254 coding upstream 59869 21154535 ~ 21168654 (+)
LOC110499108 LOC106578253 coding upstream 188412 21002651 ~ 21040111 (+)
LOC110499111 LOC106589301 coding upstream 464441 20735432 ~ 20764082 (+)
LOC110499112 LOC106589300 coding upstream 493184 20706399 ~ 20735339 (+)
LOC110499114 LOC105007436 coding upstream 540460 20654464 ~ 20688063 (+)
LOC110499104 LOC106589524 coding downstream 5607 21234211 ~ 21277617 (+)
LOC110499103 LOC106589525 coding downstream 103690 21332294 ~ 21377525 (+)
LOC110499101 ku70 coding downstream 176918 21405522 ~ 21420610 (+)
LOC110499100 LOC106589528 coding downstream 193564 21422168 ~ 21437402 (+)
LOC110499099 LOC106589529 coding downstream 208931 21437535 ~ 21442026 (+)
G1673011 NA non-coding upstream 15175 21212402 ~ 21213348 (+)
G1672983 NA non-coding upstream 34559 21191637 ~ 21193964 (+)
G1672968 NA non-coding upstream 93596 21134727 ~ 21134927 (+)
G1672922 NA non-coding upstream 131043 21093726 ~ 21097480 (+)
G1672919 NA non-coding upstream 138174 21090133 ~ 21090349 (+)
G1673036 NA non-coding downstream 56176 21284780 ~ 21284990 (+)
G1673057 NA non-coding downstream 83138 21311742 ~ 21312101 (+)
G1673183 NA non-coding downstream 125959 21354563 ~ 21354777 (+)
G1673166 NA non-coding downstream 154135 21382739 ~ 21383609 (+)
G1672973 NA other upstream 37445 21140525 ~ 21191078 (+)
G1672918 NA other upstream 138693 21089403 ~ 21089830 (+)
G1671091 NA other upstream 1000355 20227795 ~ 20228168 (+)
LOC110499153 LOC106589263 other upstream 2103287 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 3107356 18051611 ~ 18132470 (+)
G1673044 NA other downstream 67768 21296372 ~ 21296854 (+)
G1673063 NA other downstream 88194 21316798 ~ 21317412 (+)
G1673204 NA other downstream 157725 21386329 ~ 21389778 (+)
G1673231 LOC106589530 other downstream 216279 21444883 ~ 21450346 (+)

Expression


Co-expression Network