LOC118941998


Basic Information

Item Value
gene id LOC118941998
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 21496394 ~ 21517265 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118941998
ATGTCGGGTAGCAAACccttgttggttgtgttgtggtcgcGGGCGAAGAGTGGGACCGGAGACACCTTTTTTTCCAAGACCAAGCGTTTCTGCAGCATCTCCTGCTCCAAAGCCTACTCCTTCAATTGCAAGAAGTCCTCTATCCTGGCACGGctgcagGCGCAActatgtgcccagtgggatgacaTCACAATGAGGTTAAAGGTGGAGGTCCTGAATACCAGTGCCACCCTGCCTAATAAGGTTTACTGGATCGCCAGCATCAGCCAAAttccaGGCTACAAAGTTTGGTTGAGGTATGAGGGCTTTGAGGAGGACAGCAGCCTGGGCTCTGGAGACATGTACCCCATCGGATGGTGTGCCATGACCGGCAAGCTGCAGGTGCCACCACAGGCTTTGCACTAGAGCATCCCAGACTGGAAGGAGTACCCGATGAACTGGCTGGTTGGAGCCAGAACTCTGCCTATGGATTTGTATATGAAActggcAGAGTGTATGAAGGGTCCGTTCCGTACTGGGATGCATGTGGTGGACCGGACTCTGGTGAGCCTGGACGCGACTGGCGGTGGTGGACACTGTAACCGGGGGCCACCTCAGACTTGTCTATGATGACGGGGAGCAGGAGGCCCATGGGGAGCCCCTCTCTGACTTCTGGTGCCATATGTGGAGTCCCCTACTGCACCCAGTGGTCTGGTCCAGCAAAGTGGGCCATGTCATCAAACCACCTGCTACGTGATTAAACCAAACggtacactttaaaaaaaaaaaatagagcgCAGTGTCTCTGCATGCCACAACTGCTTGTTTCATGACTGTGAACCTTTTATATGTACATGGAGGCTTCTTTGATGTGGGGATAAAAATAGAGGCCATCAACCCTCTAAACCTGGGCAACATCTGTGTGGCCACTATACACAAGGTGCTGTTGGATGGCTACCTCATGGTGGACATGGATGGCACAGGTGACGGGTCTGACTGGTTCTGCTACCACACTATCTTCCATGCGATCCTACCCAAGGGATACTGCCAAAAGCACAACATACAGCTCACACCACCCCCTGGCTATGACTGGAAAACCTTCAACTGGGCCAAATACCTGGAGGAGAAGGGAACCATAGCTGCGCACAGtgtgtgtgtcttacaggaCGGCTTGAGTAACGGCTTCACTGAGAACATTAAGTTGAAGGCAGTGGACCTGATGGAGCCTCggctggtgtgcgtggccaccgTGAGGCGCTCTGTGGGCCGGCTGCTGCTGCACCTTGACCTTGATGGCTGGGAGCCAGACTTTGACCAGTGGGTGGCTTTCCAGATATCAACCATGTGGGCTGGTGTGAGGTCACAGGATACCAGCTCCAGCCACCCATTGGACCAGAGAAAGGGGTGGTTAAGAAGAAACTGGCAAACTTTATCtccaagaacccccccccccccaagccagCCGAGCAAACTGTCTGA

Function

NR:

description
PREDICTED: lethal(3)malignant brain tumor-like protein 2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118941998 True 1458 mRNA 0.54 11 21496394 21517265

Neighbor

gene id symbol gene type direction distance location
LOC110499099 LOC106589529 coding upstream 54368 21437535 ~ 21442026 (+)
LOC110499100 LOC106589528 coding upstream 58992 21422168 ~ 21437402 (+)
LOC110499101 ku70 coding upstream 75784 21405522 ~ 21420610 (+)
LOC110499103 LOC106589525 coding upstream 118869 21332294 ~ 21377525 (+)
LOC110499104 LOC106589524 coding upstream 218777 21234211 ~ 21277617 (+)
LOC110499098 NA coding downstream 1080 21518345 ~ 21562573 (+)
LOC110499096 LOC106589531 coding downstream 55770 21573035 ~ 21586408 (+)
LOC110499095 LOC106589533 coding downstream 77616 21594881 ~ 21614231 (+)
csdc2a LOC106589535 coding downstream 110640 21627905 ~ 21636035 (+)
si:ch73-139e5.4 LOC106589536 coding downstream 139670 21656935 ~ 21685353 (+)
G1673166 NA non-coding upstream 112785 21382739 ~ 21383609 (+)
G1673183 NA non-coding upstream 141617 21354563 ~ 21354777 (+)
G1673057 NA non-coding upstream 184293 21311742 ~ 21312101 (+)
G1673036 NA non-coding upstream 211404 21284780 ~ 21284990 (+)
G1673333 NA non-coding downstream 104186 21621451 ~ 21621681 (+)
G1673334 NA non-coding downstream 105943 21623208 ~ 21623435 (+)
G1673368 NA non-coding downstream 158760 21676025 ~ 21681986 (+)
G1673369 NA non-coding downstream 159049 21676314 ~ 21682360 (+)
G1673341 kcd17 non-coding downstream 183806 21701071 ~ 21701804 (+)
G1673231 LOC106589530 other upstream 46048 21444883 ~ 21450346 (+)
G1673204 NA other upstream 106616 21386329 ~ 21389778 (+)
G1673063 NA other upstream 178982 21316798 ~ 21317412 (+)
G1673044 NA other upstream 199540 21296372 ~ 21296854 (+)
tnrc6b LOC106589538 other downstream 295980 21806703 ~ 21848442 (+)
LOC110513322 rsl1d1 other downstream 419377 21936590 ~ 21959627 (+)
LOC110499192 LOC106589579 other downstream 1739539 23252800 ~ 23269058 (+)
faap100 faap100 other downstream 2062765 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 3565399 25082664 ~ 25083277 (+)

Expression


Co-expression Network