cpped1 (cpped1)


Basic Information

Item Value
gene id cpped1
gene name cpped1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22252131 ~ 22318724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955545.1
ATGAAGAAGAGCAGAAGGAATGGAGAGGTCCATCCTGCTTCATCCTTTGTAGACCTCCAGCTGGGTCTgcaaaggagggagggggactgTGACAGGGGAGGGGACGAGTGGGCCGAAGAGGTCCAACTGACCCAGCAGGCTGTGGAGGCCGTCAACAAGCTGTGCCGCAGGCCCAAGTTCATGGTGCTGTGTGGGGACATGGTCCATGCAAGtccggGAGTGAAGGCGGTATTCTCAGGCCACTACCACTGTAACgcgtggggtggggggtggggacaTGCTGACATGCTGGTGAGCTCCGCTATAGGCTGCAGGGTGGTGGTAGTGACCGCCGGCCAGATCAACCATCGCTACCACAGCCTGGAGCAGCTCAGTGGGCGGGGCATGGGCGAGGACCTCAGGAAACCACTGCAGGTCTGAGCCAATCAGAAGAGAGGACACACTCCGGACCATAAAACACCAGGGCCCGATTCATAATGCATCTCAGagtagctgatctaggatctagGATTTTTtcctgcaaagaaaacactatttTATAGTGAAAAGATGTAGGCATTTAGAATGAATTATGGAGTGGATCTTTATTGTGACCGGTGACATCACGTGCCCCGCGCAGTCCTACCTTCAAAGTGATTCGGCAATTTCCATCATCATTTGTCGCAATAAAGGAAGTTTGACACAAGAAAAATTCACCCTTGTCAAAAGCTAAACAAATGTTGTAGATCTTTAGAAAAGCTATCCTTtatctgccgtttccattacACATGTCCAATGATTTTTTTTGCGACATTGTTTTTATAGAATAAAACTGGGTCAATggggtcaatggaaacctgcctagtGACGTTCACACTTGTCACAAATTCCCCTGGTACTGCTGCTTATTCCGTGCACCATAAATTCCCCTGATACTACTGCTTAATCCATGCACCACAAATTCCCCTGATACTACTGCTTAATCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCATGCACCACAAATTCCCCTGGTACTGCTGCTTATTCCGTGCACCACAAATTCCCCTGGTACTACTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTAATCCATGCACCACAAATTCCCCTGATACTACTGCTTAATCCATGCACCACAAATTCCCCTGATACTACTGCTTAATCCATGCACCACAAATTCCCCTGATACTACTGCTTAATCCATGCACCACAAATTCCCCTGATACTACTGCTTAATCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCGTGCACCACAAATTCCCCTGGTACTACTGCTTATTCCGTGCACCACAAATTCCCCTGGTACTACTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCGTGCACCACAAATTCCCCTGGTACTGCTGCTTATTCAGTGCACCACAAATTCCCCTGATACTACTGCTTAATCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCGTGCACCACAAATTCCCCTGGTACTGCTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTAATCCATGCACCACAAATTCCCCTGATACTGCTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCGTGCACCACAAATTCCCCTGGTACTACTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCGTGCACCACAAATTCCCCTGATACTACTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTAATCCATGCACCATAAATTCCCCTGATACTACTGCTTATTCCGTGCACCACAAATTCCCCTGATACTACTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCGTGCACCACAAATTCCCCTGATACTACTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCATGCACCACAAATTCCCCTGGTACTACTGCTTAATCCATGCACCATAAATTCCCCTGGTACTACTGCTTAATCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCATGCACCACAAATTCCCCTGGTAGTGCTGTTTATTCCATGCACCACAAATTCCCCTGGTACTACTGCTTAATCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCGTGCACCACACATTCCCCTGGTACTACTGCTTATTCCGTGCACCACACATTCCCCTGATACTACTGCTTATTCCATGCACCACAAATTCCCCTGATACTACTGCTTATTCCGTGCACCACACATTCCCCTGGTAGTGCTGCTTATTCCGTGCACCAGCTCCGGAGGTTTATATCACCGGCCTATAGGCGTCACTGAACTGTTTCATTACGCACACCaggttcccattccccctgattagtaattgtatatatgTGCCATCTGTTCACCATTGTTTTGTCGG

Function

symbol description
cpped1 Predicted to enable metal ion binding activity; protein serine phosphatase activity; and protein threonine phosphatase activity. Predicted to be located in cytoplasm. Orthologous to human CPPED1 (calcineurin like phosphoesterase domain containing 1).

NR:

description
PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein phosphatase CPPED1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955545.1 True 2652 mRNA 0.47 6 22252131 22318724
Loading

Neighbor

gene id symbol gene type direction distance location
snx29 snx29 coding upstream 160551 21974338 ~ 22091580 (+)
LOC110499590 tnfrsf17 coding upstream 277936 21972738 ~ 21974195 (+)
LOC110513322 rsl1d1 coding upstream 292605 21936590 ~ 21959627 (+)
ercc4 ercc4 coding downstream 22005 22340729 ~ 22347757 (+)
mrtfba mkl2 coding downstream 29193 22347917 ~ 22388445 (+)
foxj1b LOC106589554 coding downstream 142516 22461240 ~ 22465079 (+)
zgc:163057 hbad coding downstream 242725 22561449 ~ 22562880 (+)
LOC110499167 LOC106589556 coding downstream 253003 22571727 ~ 22572592 (+)
G1674044 NA non-coding upstream 45146 22200118 ~ 22206985 (+)
G1674065 NA non-coding upstream 55727 22196197 ~ 22196404 (+)
G1674064 NA non-coding upstream 56777 22194979 ~ 22195354 (+)
G1673841 NA non-coding upstream 201358 22048754 ~ 22050773 (+)
G1673838 NA non-coding upstream 207743 22042443 ~ 22044388 (+)
G1674292 NA non-coding downstream 8641 22327365 ~ 22327568 (+)
G1674319 NA non-coding downstream 69742 22388466 ~ 22391636 (+)
G1674331 NA non-coding downstream 78296 22397020 ~ 22397239 (+)
G1674333 NA non-coding downstream 81604 22400328 ~ 22400573 (+)
G1674339 NA non-coding downstream 87216 22405940 ~ 22406284 (+)
tnrc6b LOC106589538 other upstream 406265 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 801785 21444883 ~ 21450346 (+)
LOC110499100 LOC106589528 other upstream 814750 21422168 ~ 21437402 (+)
G1673204 NA other upstream 862353 21386329 ~ 21389778 (+)
LOC110499192 LOC106589579 other downstream 938080 23252800 ~ 23269058 (+)
faap100 faap100 other downstream 1261306 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 2763940 25082664 ~ 25083277 (+)
G1677738 NA other downstream 3317967 25636691 ~ 25641614 (+)
G1678963 NA other downstream 4143470 26462194 ~ 26467953 (+)

Expression

cpped1(cpped1) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
End of interactive chart.

cpped1(cpped1) Expression in each Bioproject

Bar chart with 9 bars.
cpped1(cpped1) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6.
End of interactive chart.

Co-expression Network