LOC118942052 (mkl2)


Basic Information

Item Value
gene id LOC118942052
gene name mkl2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22386323 ~ 22391573 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037965.1
atagagtaGGGCCtagtgaatgtatttcaattgacggatttccttatatgaactaaaatctttgaaaatgttgcgTTTAcacttttgttcagtgtagttacatTTCAGACAAAGAACCAGGGTTGAACGGGAGACAAGTACCATACAGAAGACACAGAATTAGGTAAGGCCGAAATCAAGATCCGCTTGCAATGATCAACACGATGACATCTTGTTATGAGATAGCGACAACACAAATGAACCAGTGCTGTAAGTGTAAGGCTATGGCCTTATTGCTTCACTAACATCCTATTAACAGTAGTAGTACACAGGTTTGACATGATTCAGAATCTAAATGTTTTAGAATCCAACCGTCATATTTTACAGCATACCCATGTATATAGATGCTTTTGGCCATATATTTCTGGTATgggtggtaaaaaaaaaacatttacagtaaTCTTCCTCTTGCATATATACAGAAAAAACTATTGGATTTCAGAACACAAAaatgtgataaatacaattttaaaaaagtgGCAACAATAGATTTTCACCAATGTTTCACTGCCTTATTAGGCAAcaattgaaaaacaaataattcctTGATAGCCCTAAACCACAGTTACAAGCATCTGGTTCCTAATGGTAACAGACAGTGTGGACAGTATTTGGCATTATTACCTGCCTATATGTTATCCTTAGTGTTTGACTTGTTGGATAAGAATGATTGTTCAAACATCAAAATAAAGCCATGATATTCCAAAGTGCTATACAGTACAACCGTATTAGTTCTATACAATATTGATCAGAATAATATTTGGATTGAGATGCTGAGTACTACTAAAGTCGTTTGACATGATATGCCAGGTAGAAAGAACTACACAacgcaaatttaaaaaaaaattatacattaTACACAAACACCATCATCAAATTCAGCCACAAAATGGTAGCTATACCAGAAGCTTAATGTCATCCCTTTTAGTTTAACTCTGTTGGTCACACCACTGTGGGTGTTTACTGTGCGTTTTACCACATAACACAAACCAAACAGGACAGAGGGAACAGTCCTAcaaagctgttctgtgagacaaACCTTTTTAAAACTCAGCCTATAAAAGTTGTTCATTTGTCTTATGAACGTCCAACTTCATAAAAATAAAGACGACTCAAGTGAGTTGCAGCCAACTCAGTGACAGAGACAAATATAGCCCGATATCAGACATGGTTTAAAACgttcaacaacacagagacacacagaaagggcacacatagacacacatgcagacagagaCATCATGCATCATTTCTCAGACAGAACCACAGACACACAATGAGAGACTGAGAAGAATGCTGAGAGACCGAGACAAATGCAGAGATTTGACAGACAGATTtcaggacagacagagaagatTACAGTATAGCACCTCTTTCTGCCAGAGGTCATGCAGCCACATTAAAACATGTCACAAACACTTGTAGCATACAAAACAACTGGCACTCAGACTATCATGCCAACTTcttgtcactcattgtcatgTCAAACATGCTTGGCAATAagcaatggagttggcaagagcacaaacagccTTGGGACCAGGCTAGCATACAGTAAGTATATACACATTAACCTCTATGTAGTGTACCTGTGTGATAGCATAATTGTTCCCTTGCCACTGATACGTCAGTTGTCTTTCAGAAGATAAAGCTGCCAACAATGTAGTCTCCACTTTCTTTCAGACGGATCAACTTGGAATCCTTGAATTGAAAGTACACAAAGATAACCAACACGTGGATCGACGTTTTTTTCAATAAACGGTTCATTAAAATCTTTATCTGTGATTCAGATTTCCTTGTGTGAGGGGCAGGTGTAAGGCCCGCCTCCTTAGTGCATAGCTCAGAGTGGGAGGAGTCCACTCCTCCTCATCCAATAGGAGTGAGTCTTTGTTCTCAGTGTCAGTTCAGTTGCTTAAATAGTCCAACTGACCACAGCGTCTGTTTTGTTCAGGAAAAAAACAGTCTCATCCAAAACTATATGTAGCTATGTCGCAATACCAAATATAGGTATGTCGCAATACCAAATATAGGTATGTCGCAATACCAAATATAGGTATGGCGCAAAAAAAAAGACCAGTGTAAAACAGCCTTGTACTCTTGTCAGTTTTACTTGGGTCAGTTATGCTGTTTGTCGTGGCTTGTGCACAGCAGATCTGT
>TU1915780
CCAGGTAGAAAGAACTACACAacgcaaatttaaaaaaaaattatacattaTACACAAACACCATCATCAAATTCAGCCACAAAATGGTAGCTATACCAGAAGCTTAATGTCATCCCTTTTAGTTTAACTCTGTTGGTCACACCACTGTGGGTGTTTACTGTGCGTTTTACCACATAACACAAACCAAACAGGACAGAGGGAACAGTCCTAcaaagctgttctgtgagacaaACCTTTTTAAAACTCAGCCTATAAAAGTTGTTCATTTGTCTTATGAACGTCCAACTTCATAAAAATAAAGACGACTCAAGTGAGTTGCAGCCAACTCAGTGACAGAGACAAATATAGCCCGATATCAGACATGGTTTAAAACgttcaacaacacagagacacacagaaagggcacacatagacacacatgcagacagagaCATCATGCATCATTTCTCAGACAGAACCACAGACACACAATGAGAGACTGAGAAGAATGCTGAGAGACCGAGACAAATGCAGAGATTTGACAGACAGATTtcaggacagacagagaagatTACAGTATAGCACCTCTTTCTGCCAGAGGTCATGCAGCCACATTAAAACATGTCACAAACACTTGTAGCATACAAAACAACTGGCACTCAGACTATCATGCCAACTTcttgtcactcattgtcatgTCAAACATGCTTGGCAATAagcaatggagttggcaagagcacaaacagccTTGGGACCAGGCTAGCATACAGTAAGTATATACACATTAACCTCTATGTAGTGTACCTGTGTGATAGCATAATTGTTCCCTTGCCACTGATACGTCAGTTGTCTTTCAGAAGATAAAGCTGCCAACAATGTAGTCTCCACTTTCTTTCAGACGGATCAACTTGGAATCCTTGAATTGAAAGTACACAAAGATAACCAACACGTGGATCGACGTTTTTTTCAATAAACGGTTCATTAAAATCTTTATCTGTGATTCAGATTTCCTTGTGTGAGGGGCAGGTGTAAGGCCCGCCTCCTTAGTGCATAGCTCAGAGTGGGAGGAGTCCACTCCTCCTCATCCAATAGGAGTGAGTCTTTGTTCTCAGTGTCAGTTCAGTTGCTTAAATAGTCCAACTGACCACAGCGTCTGTTTTGTTCAGGAAAAAAACAGTCTCATCCAAAACTATATGTAGCTATGTCGCAATACCAAATATAGGTATGTCGCAATACCAAATATAGGTATGTCGCAATACCAAATATAGGTATGTCGCAATACCAAATATAGGTATGGCGCAAAAAAAAAGACCAGTGTAAAACAGCCTTGTACTCTTGTCAGTTTTACTTGGGTCAGTTATGCTGTTTGTCGTGGCTTGTGCACAGCAGATCTGTAATAAACAAACCACATTCTCAGACTGACTGTATGGCACAGCAGCATGCTTCCACAGAGCAATGGCTGTAGATCCAGACCCTGTAGCATGACCAATGTGAAACGCATGCTAAGTTAACACATCCACGTGTTCACCGCAAGGAAAGCTGAACAGCGTAAGGCTGACTGCCATGTGTTGTATAGTGAAAGCTTTGCCCAATTCAATAAAAACTCCAGCAGGGCTGAGGGAACAGCTAACATTTACAGGATATTTACATACCACCTGCCTCCTTGTTCATTTGGCTCTGGTCCCAGTACTCCTATTAAACATCCACTGCCCCGATCACCAGCTGGCTAATCTTATTATATGGCAtaacattttaaatattttttatgttttaaatACACAAGGAGGACTAACATCACCTGACCAAGTCTGTATTTGTTACATTGAGTCCCTCTATCCCTgcaccactcctcctcttccttccttcctcactccatccatcccttctccCTCAGTCCCAGTGCAGCTGCAGGTCGTGTGTATCCAGGAAGTCTGAAGGAATCCCCAGGGGTGTGAGCCCCCCCGCGGGGTCGGACGGCATGGTTAGATCCAGCCACTCCATGTTGTCCAGGACTGTGTCGGACAAGCCCATgttgagggaggaagggggagacgtGGAGTCGCAGAAGGACAGCTCTGAGGTGTCCATTggggagtagggttgatccaggAGCTGGGACTGCAACTCCTCGATCAGACCCAGGGTGCGGGGATC
>TU1915782
CCAGGTAGAAAGAACTACACAacgcaaatttaaaaaaaaattatacattaTACACAAACACCATCATCAAATTCAGCCACAAAATGGTAGCTATACCAGAAGCTTAATGTCATCCCTTTTAGTTTAACTCTGTTGGTCACACCACTGTGGGTGTTTACTGTGCGTTTTACCACATAACACAAACCAAACAGGACAGAGGGAACAGTCCTAcaaagctgttctgtgagacaaACCTTTTTAAAACTCAGCCTATAAAAGTTGTTCATTTGTCTTATGAACGTCCAACTTCATAAAAATAAAGACGACTCAAGTGAGTTGCAGCCAACTCAGTGACAGAGACAAATATAGCCCGATATCAGACATGGTTTAAAACgttcaacaacacagagacacacagaaagggcacacatagacacacatgcagacagagaCATCATGCATCATTTCTCAGACAGAACCACAGACACACAATGAGAGACTGAGAAGAATGCTGAGAGACCGAGACAAATGCAGAGATTTGACAGACAGATTtcaggacagacagagaagatTACAGTATAGCACCTCTTTCTGCCAGAGGTCATGCAGCCACATTAAAACATGTCACAAACACTTGTAGCATACAAAACAACTGGCACTCAGACTATCATGCCAACTTcttgtcactcattgtcatgTCAAACATGCTTGGCAATAagcaatggagttggcaagagcacaaacagccTTGGGACCAGGCTAGCATACAGTAAGTATATACACATTAACCTCTATGTAGTGTACCTGTGTGATAGCATAATTGTTCCCTTGCCACTGATACGTCAGTTGTCTTTCAGAAGATAAAGCTGCCAACAATGTAGTCTCCACTTTCTTTCAGACGGATCAACTTGGAATCCTTGAATTGAAAGTACACAAAGATAACCAACACGTGGATCGACGTTTTTTTCAATAAACGGTTCATTAAAATCTTTATCTGTGATTCAGATTTCCTTGTGTGAGGGGCAGGTGTAAGGCCCGCCTCCTTAGTGCATAGCTCAGAGTGGGAGGAGTCCACTCCTCCTCATCCAATAGGAGTGAGTCTTTGTTCTCAGTGTCAGTTCAGTTGCTTAAATAGTCCAACTGACCACAGCGTCTGTTTTGTTCAGGAAAAAAACAGTCTCATCCAAAACTATATGTAGCTATGTCGCAATACCAAATATAGGTATGTCGCAATACCAAATATAGGTATGTCGCAATACCAAATATAGGTATGGCGCAAAAAAAAAGACCAGTGTAAAACAGCCTTGTACTCTTGTCAGTTTTACTTGGGTCAGTTATGCTGTTTGTCGTGGCTTGTGCACAGCAGATCTGTAATAAACAAACCACATTCTCAGACTGACTGTATGGCACAGCAGCATGCTTCCACAGAGCAATGGCTGTAGATCCAGACCCTGTAGCATGACCAATGTGAAACGCATGCTAAGTTAACACATCCACGTGTTCACCGCAAGGAAAGCTGAACAGCGTAAGGCTGACTGCCATGTGTTGTATAGTGAAAGCTTTGCCCAATTCAATAAAAACTCCAGCAGGGCTGAGGGAACAGCTAACATTTACAGGATATTTACATACCACCTGCCTCCTTGTTCATTTGGCTCTGGTCCCAGTACTCCTATTAAACATCCACTGCCCCGATCACCAGCTGGCTAATCTTATTATATGGCAtaacattttaaatattttttatgttttaaatACACAAGGAGGACTAACATCACCTGACCAAGTCTGTATTTGTTACATTGAGTCCCTCTATCCCTgcaccactcctcctcttccttccttcctcactccatccatcccttctccCTCAGTCCCAGTGCAGCTGCAGGTCGTGTGTATCCAGGAAGTCTGAAGGAATCCCCAGGGGTGTGAGCCCCCCCGCGGGGTCGGACGGCATGGTTAGATCCAGCCACTCCATGTTGTCCAGGACTGTGTCGGACAAGCCCATgttgagggaggaagggggagacgtGGAGTCGCAGAAGGACAGCTCTGAGGTGTCCATTggggagtagggttgatccaggAGCTGGGACTGCAACTCCTCGATCAGACCCAGGGTGCGGGGATC
>TU1915787
tcccatgtttcatgagctgaaataaaagattgcagaaatgttccatacacaccaaAAGCTTatctctctcaaatgttgtgttactgagcatttctcctttgccaaaatactccatccacctgacaggtgtggcatatcaagaagctggttaaacagcatgatcattactaaggtgcatcttgtgctggggacaataaaagtccactctGAAATTTGcagtcaagttttgagggagcgtgcaattggcatgcggactgctggaatgtccaccagGGCGGTTGTCAGAGAATGGaacgttaatttctctaccataagcggcctaaacgtcgttttagagaatttggcaaccggcctcacaagcacagaccaggtgtaaccacgccagcccaggacctccacgtccagttagaccaggtgtaaccacgccagcccaggacctccacatccagttagaccaggtgtaaccacaccagcccaggacctccacatccagttagaccaggtgtaaccacgccagcccaggacctccacatccagttagaccaggtgtaaccacgccagcccaggacctccacatccagttagaccaggtgtaaccacgccagcccaggacctccacatccagttagaccaggtgtaaccacaccagcccaggacctccacatccagttagaccaggtgtaaccacaccagcccaggacctccacatccggttagaccaggtgtaaccacaccagcccaggacctccacatccggttagaccaggtgtaaccacaccagcccaggacctccacatccagttagaccaggtgtaaccacgccagcccaggacctccacatccagttagaccaggtgtaaccacaccagcccaggacctccacatccggttagaccaggtgtaaccatgccagcccaggacctccacatccagttagaccaggtgtaaccacaccagcccaggacctccacatccggttagaccaggtgtaaccacgccagcccaggacctccacatccggttagaccaggtgtaaccacgccagcccaggacctccacatccagttagaccaggtgtaaccacaccagcccaggacctccacatccggttagaccaggtgtaaccacgccagcccaggacctccacatccagttagaccaggtgtaaccacgccagcccaggacctccacatccggttagaccaggtgtaaccacgccagcccaggacctccacatccagttagaccaggtgtaaccacgccagcccaggacctccacatccggttagaccaggtgtaaccacgccagcccaggacctccacatccgcttcttcacctgcgtaaccgtctgagaccagccaaccgGACAGCTGAAGAAATTGCGGGTCTGAACAACCGAATAATTTCTGACCTTAAGGTCATAAATCGTCTCAGGAAAGCTCATCAGTGTGCTCagagtcttgacctgactgcagtttgggcGTCGTAAAAGACTGCAGTGGGCAAAGGCGCACCCTCGATTCCCACTGGTGCTAATCATGGTTGAATCaaggtttcaactgtaccgggtacATGGCCGATGTGTGAGTTAgaggttttctgatgtcaacgttgtgaacagagtaccccatggtggtggtggggttaaggtatgggcaggcataagctatggacaacgaacacaattgcattttattgattgcaatttgaatgcacagagatcctGCGGCTCATTGTcgtgccaccatcacctcatgtttcagcatgaaaatacACAGCCCCTGTCAgaaagatctgtacacaatttctggaaactgaaaatgtcccagttcctacatgacctgcatactcagacaggtcacccattgagcattttTGGGATGCTATGGATCgatgtgtatgacagcatgttccagttcccaccaatatccagaggagtgggacaacatgccccaatcaacagcctgatcaactctatgtgaaggagatgtgtcatgctgcctgaggcaaatggtggtcacaccagatactgactggttttctgatccacacccctaccttttttaaggtatctgtggccAACAGATACACAtcttattcccagtcatgtgaaatccatagagtaGGGCCtagtgaatgtatttcaattgacggatttccttatatgaactaaaatctttgaaaatgttgcgTTTAcacttttgttcagtgtagttacatTTCAGACAAAGAACCAGGGTTGAACGGGAGACAAGTACCATACAGAAGACACAGAATTAGGTAAGGCCGAAATCAAGATCCGCTTGCAATGATCAACACGATGACATCTTGTTATGAGATAGCGACAACACAAATGAACCAGTGCTGTAAGTGTAAGGCTATGGCCTTATTGCTTCACTAACATCCTATTAACAGTAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037965.1 False 2196 mRNA 0.38 2 22387082 22389323
TU1915780 False 2133 TUCP 0.44 2 22386323 22388478
TU1915782 False 2110 TUCP 0.44 2 22386323 22388478
TU1915787 True 2420 lncRNA 0.50 2 22389022 22391573

Neighbor

gene id symbol gene type direction distance location
shisa9a shisa9 coding downstream 134636 22204992 ~ 22252446 (-)
maff LOC106589545 coding downstream 484865 21896705 ~ 21902217 (-)
LOC110499087 LOC106589541 coding downstream 600878 21684993 ~ 21786204 (-)
trnar-ccu-54 NA coding downstream 676890 21710120 ~ 21710192 (-)
LOC110499092 kcd17 coding downstream 685319 21685612 ~ 21701763 (-)
LOC110499164 litaf coding upstream 2318 22391641 ~ 22395025 (-)
ubald1a LOC106589553 coding upstream 25291 22414614 ~ 22446035 (-)
rhbdf1b LOC106589555 coding upstream 101415 22490738 ~ 22537702 (-)
aqp8a.2 aqp8 coding upstream 214273 22603596 ~ 22607933 (-)
aqp8a.1 LOC106589558 coding upstream 219388 22608711 ~ 22615064 (-)
G1674459 NA non-coding downstream 24890 22361971 ~ 22362192 (-)
G1674458 NA non-coding downstream 25374 22361500 ~ 22361708 (-)
G1674456 NA non-coding downstream 29265 22357587 ~ 22357817 (-)
G1674449 NA non-coding downstream 38499 22348353 ~ 22348583 (-)
G1674448 NA non-coding downstream 38905 22347950 ~ 22348177 (-)
G1674523 NA non-coding upstream 75087 22464410 ~ 22465055 (-)
G1674524 NA non-coding upstream 76058 22465381 ~ 22465616 (-)
G1674528 NA non-coding upstream 83139 22472462 ~ 22472718 (-)
G1674534 NA non-coding upstream 94266 22483589 ~ 22483987 (-)
G1674299 NA other downstream 55276 22331350 ~ 22331806 (-)
G1673740 LOC106589538 other downstream 542289 21836333 ~ 21844793 (-)
phf5a LOC102780084 other downstream 790896 21589006 ~ 21596518 (-)
G1672649 dhx8 other downstream 1657010 20729275 ~ 20730072 (-)
G1672588 NA other downstream 1716665 20620742 ~ 20670417 (-)
G1674481 LOC106613263 other upstream 7586 22396909 ~ 22397223 (-)
G1674592 NA other upstream 202247 22591570 ~ 22601548 (-)
msrb1b LOC100705913 other upstream 446500 22835823 ~ 22837899 (-)
G1675801 LOC107699850 other upstream 467790 22857113 ~ 22864346 (-)
LOC118942052 mkl2 other downstream 544 22386323 ~ 22391573 (-)

Expression


Co-expression Network