zgc:163057 (hbad)


Basic Information

Item Value
gene id zgc:163057
gene name hbad
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22561449 ~ 22562880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160522.2
AGGAAAACAACCCGAAGACAGGAGTAGGCCTACCGCAAACGACCGCTGCAAATGACCATTTATTTTACCAAATTTAGACAATTGTTGTAAATACTGCCAGAAAAAATGCAAGCAAATCACGTTGACGGGTTATACTGGTGCAAAAAAATGGTTGACTAACACCTTTACGCAGACCTGTGCCGTGCGCCCGTCCAGACATTCAACTTCTACGCATAGCACCAGCGCAACGGGTTACAATATGCTCACAGACCACGAAAAAGAGCTGATCGCTAAAATTTGGGACAAAATGATTCCCGTGGCTTCCGACATCGGAGCTGAATGTCTTCTAAGGATGATGACGACTTTTCCCGGAACGAAAACATACTTCGCCCACCTGGACATCAGACCCCGGTCCCCACACCTGCGTTCCCACGGGAAGAAGATAGTTCTCGCGATAGCTGAGTGTTCCAAAGACATCAGCTCGATGATGGTCACCCTGGCACCGCTCCAAACACTGCATGCCTACAAACTGAGAATAGACCCCTGCAACTTCAAGCTTCTTTGTCACTGTATCCTCGTGACTTTGGCCGCTCACATGGGTGATGAGTTCGATCCTGTCGCGCACGCAGCCATGGACAAGTACCTCTCGGCCTTCGCAGCCGTCCTTGCAGAGAAATACAGATAAGGAGCATCATAGCCCCATCATATAAACCAAATGTTGCTGTTCCATTAACTTAGAGtattttatttgtgtgtttttctTTTGTAATAAAACATG

Function

symbol description
hbad 4-hydroxybenzoyl-CoA reductase subunit beta

NR:

description
Hemoglobin subunit alpha-D

GO:

id name namespace
GO:0015671 oxygen transport biological_process
GO:0005833 hemoglobin complex cellular_component
GO:0005506 iron ion binding molecular_function
GO:0019825 oxygen binding molecular_function
GO:0005344 oxygen carrier activity molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160522.2 True 757 mRNA 0.47 3 22561449 22562880

Neighbor

gene id symbol gene type direction distance location
foxj1b LOC106589554 coding upstream 96370 22461240 ~ 22465079 (+)
mrtfba mkl2 coding upstream 173004 22347917 ~ 22388445 (+)
ercc4 ercc4 coding upstream 213692 22340729 ~ 22347757 (+)
cpped1 cpped1 coding upstream 242725 22252131 ~ 22318724 (+)
LOC118942051 NA coding upstream 279606 22260747 ~ 22281843 (+)
LOC110499167 LOC106589556 coding downstream 8847 22571727 ~ 22572592 (+)
LOC110499592 LOC106589557 coding downstream 11662 22574542 ~ 22575413 (+)
LOC118942010 LOC106589557 coding downstream 19936 22582816 ~ 22583667 (+)
LOC110499593 LOC106589557 coding downstream 28223 22591103 ~ 22591954 (+)
LOC110499168 LOC106589557 coding downstream 37606 22600486 ~ 22601541 (+)
G1674446 NA non-coding upstream 4239 22556984 ~ 22557210 (+)
G1674441 NA non-coding upstream 10678 22550501 ~ 22550771 (+)
G1674434 NA non-coding upstream 20300 22540922 ~ 22541149 (+)
G1674409 NA non-coding upstream 56323 22504123 ~ 22505126 (+)
G1674404 rhbl4 non-coding upstream 64658 22496465 ~ 22496791 (+)
G1674616 NA non-coding downstream 73777 22636657 ~ 22636891 (+)
G1674618 NA non-coding downstream 76674 22639554 ~ 22639924 (+)
arhgap17a arhgap17 non-coding downstream 125246 22642425 ~ 22691724 (+)
G1674659 NA non-coding downstream 136053 22698933 ~ 22699144 (+)
G1674664 LOC106609649 non-coding downstream 142680 22705560 ~ 22706269 (+)
LOC110513322 rsl1d1 other upstream 601822 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 715583 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 1111103 21444883 ~ 21450346 (+)
LOC110499100 LOC106589528 other upstream 1124068 21422168 ~ 21437402 (+)
G1673204 NA other upstream 1171671 21386329 ~ 21389778 (+)
LOC110499192 LOC106589579 other downstream 693924 23252800 ~ 23269058 (+)
faap100 faap100 other downstream 1017150 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 2519784 25082664 ~ 25083277 (+)
G1677738 NA other downstream 3073811 25636691 ~ 25641614 (+)
G1678963 NA other downstream 3899314 26462194 ~ 26467953 (+)

Expression


Co-expression Network