tex2l (LOC106589568)


Basic Information

Item Value
gene id tex2l
gene name LOC106589568
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22841268 ~ 22865328 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956015.1
GAGGAGCTCTAGAGCTTCTGCTGATGATGCTGGAAGCGCGTGTCTTATCTAGAACAGAGTCCGCAAATGGGAGGTGTGCACGAGCGCAGCGTGTGGTGGAACTAGAGTCACACTATATTTTCTATTAAAAGATCAGTGGGCAGCGCACCTTTCTCTTTTTAATAGACAGTCACTACACATCACTGAACACGAACAACCGTCAATTATTCTTACTGCGGTCCGCCGTGAAGAATTAACATTGTTGATACAAGTGGGCGCAGCAAACCAGGCTTGTGATGTGACAAGCGCGCACTATGAGCATTTCGCAGGACATCTCTCTAGGTCGCATTTGACAACCTTGACACACCGTTATTTTGGAGAATAAAAACTATCGAATTGTAAATCGTATTGTCAAGTTAATCGTGGAGACTGGAGTCGCTTCTCGATGTGTCAGTGATAATTGAACAATACAGAAGAAGTGGTGTGGTTTGTGTCCATGCTGCAGCGATAACCAGGTGCCTCGGGTCTACAATGATAAGACAATAAATGGCAGAGATAGGAGAAAATGTggcaagaggaagagaagaaggagaTGATGGAGTGGGAGGTTTAAGGCCACCTCATGACCCCCAGAGCCCTGCCCACTTTCCCTTTTCTGCTCCCCCAGTTAGGGCCCACCATGTCGGGCTCAGGAGGGGCATCGTGATCCAGCTAACAGGCACAGAGGGTGAGTGGGACAGTCTGGATGACAACGAGCTCATCTTCCCCCTTGAACACAACGACTATGACGACCAGACTCCCTACATCTCCCTCTCCAAGGAGAGACAGAACTCCATGGAAGAGGAGAACCAACACTGCCTGGACTCCCCAGCCTTCCAcgtacccctctccccctcctcacctgGGTCCCTGGGGGACTGCTCCAACTCAGCCCCCAGCTTCCTCtcccccagcccagccacccCCACCCACCGGCCACTGGCTAGCCTGGTCAAGTCCCTGTCCACGGAGCTGGAGCTCCCTCATGGCTCATCCCTCAGACCCAGGCCCTTCCTCAGCCTAGTCAAGTCCATCTCTACTGAGATCTCCCGCTCAGAGCCAGAGGTGTCGCAGTCCAAGTCTGACTCCCGCCTCAACCTGCACCTGCAGTGGAAGAACCTGACTCAGCCTAAGGGAAGGAGTGACGGAGACTCCCGTACCGCGCCACCCTCGCCCATCGCTCTATCCCCGTCCGAGGGCACCAAGGCGGGCTTCTTCAAAATAGAGCTGGAGGACACGAAGCGGAAGTTCTCTGAGGCCATGCAGGAGCCTATGTTCAGTAAACCTATCAGTATTTTCAGTAAGATCATGGGGGATGAGAAGGAGAATGCAGCAGCAGGCAGCCCCAAGCACCAGAGAGCTACAGGGACTCACTCAGCTGGCTCCCCCAGCTCCAGAGGTGTCTATGTGGGGAGGATGGAAAGCACGGAGGTGGGCATCACAGAGTCTCCGCTGCGGAGCACCAAGAGAACGGATGGTGACTCTCCGCCGGTGTTTGACTGGCCGTGTGTCAAACACCCAAAGAAGGGTCTGCCCACTAGAACATGTTCTGTCCACGATCACCACGGTAACAAACCCAACGACAATTCAGAGGAACTGGAGATCTGCACCTACGATGAAGTCATGCAGGTTTTTGCCATTGAGAGTCATCATCACAGGCGCCCGCGGAGATTGCCTGGTTCGCTGATCTCCTCAGGACCCCATCGTGTGGTTGTTcaacccacctctccacctcctccaccacacatGGTGTTGTTCTGTGTGGCTGTGTTGTCCTACGCCTACTTCATCCTTCCCCTGGGCCCCTATATATCAGGCCTGGCTCTGGGCGTGGCCTTTGGCTTCCTGCTGGGGCTGCTGCTCATCAGGTTGGGCTCAACCAGACACACTGCTCAGCCACATCCACACAGAGACGTTCAGGCCCTGACTGAGGTTGTTAAGCAGGCTGATGCCCTCGGCAACGAATCAGACGTCCTCAAGGGCTGGCTGAACGAGATGTTTGAGTACGACCCAGAGACCTACCACCTGTCCCTGACCCACTCTGTGTTCGCCAGCCTGGAGGGGCACTGCCTTCGCCTGGACTACCCCAGGAACAACATCAGCCGCAGAGCCACCTACGATGAAAAGCCTCCCGAGGCTGCGGTTGTCAGCACACGCTGCTTCCAGCTACGACACAGCAAGGTGTTCCTGCTGCCCTCTGAGCTAGCCCGTAAGAGGCTGTGGAACCTGAAGTACCCTATCTGCATTGAGctggcagagggagagggggtcatggaggaggggaggggcaCAGTGGAGACGCCAAAAGAGGAGCAGGGGGGAAACCCCCAACTCCAAACACGACCCACCTCCAACCCCAAACCAGCAGCCAACCTCCCCACAACCCTATACCTCTTCGGACggacaggaagagagaaggaggagtggttTCATCACTTCCTGTCCGCGTCCATGGTaatggagaaggagaaggagaatgagaggCCTGGCAGATGTGTGTGCAGATCAGATGTGCCGGTATTGCGAGGGGTGAGCCCTTCAAGACAGTCCCAGGACAGCAGAGGTTCCAGCAGGATTGGGAGCACTGAAGAGGACCTCCCCATTCCCCCTTCTGCCCCCTCCATCCAACCATCCAGGATGGGCTCTCCACTGCTGGACTACCCTACCTACATGGCTCGTTTCCTGCCCTCAGAGCAGCCCAGCCCCCTGCCCAGTCCACCCCTCAACAGCACAGAGACAAGCCCCACCAACAAAGTGAGGTGCACCTGTGATTTCCCAGAGTTCCCGGTGGAGGACAACACTGACTGGGTCAATGCACTGATTGGTCGAATATTCTGGGACTTCCTGCGTGAGAAATATTGGGCGGACATTGTCTCCAGAAAGATCCAGAAAAAGTTGAGCAAAatcagactgccTTACTTCATGAATGAGCTGACTCTGACTGAACTGGACATGGGCTCCTGTCTGCCCCAAATCACCAGTGCGTCCAGACCTGTAGTCAACAGCAGAGgcTTGTGGCTGGAGCTGGAGGTGGTATACACTGGGGCCCTGCAGATGACCCTGGAGACCAAGATCAACCTGTCCAAACTGGGCAAGGAGGGCAAGGAGGGCAAGGAGGGAAGCCTGGACACTGACAGCCTCACTGATACTGGCAGCCTAGGATCCAGACCCGTCCTCAGTGTTTTGGCTGACAGTGATGAAGAGTCCTCCAGCGCCGGCTCTTCAGATGAGGAGGAAGTACTGCTCTCAGAGCACCAAAGCATTGTGGGAGAAAAGGGGACTCTACCTGGTGCTGAAGGgATTGCTGCTGGTGGCGGGAGGACAGGCAGGCGGATTTTGAGATTTGTAGACAAAATTGCTAAGTCTAAGTACTTCCAGAAGGCGACAGAGAATGAGTACATCAAAAAGAAGATTGAGGAGATGTCCAACACGCCCCTGCTGCTGGCAGTGGAGGTTCAGGAGCTTTCTGGAACACTGGCTGTcaacatccctcctccccctactgATAGAATATGGTACAGTTTCTGTGTGCCTCCCAAGCTGGACCTGCGTGTCAGACCCAAgctgggggagagggaggtcACCTTCTGTCACGTGACCGAGTGGATCGAGAAGAAGCTGCAGGATGAGTTTGAGAAAGTTTTTGTGCTGCCCAACATGGACGATATCTACCTGCCTCTGATGCACTCTGGGATGGACAGTCCTCCAGCTGGGCTGCTGGAGGAGTGTCCAGCCCAGTCGTCACACTCACAACACTCCTCCATGGAGTCCATCGAGAGGATCTCCCAGGACAATACTGCTGCAGACTTGGACTTggactacactgaacaaaaatatgaactcaacatgtaaagtgttggtcccatgtttcatgagctgaaataaaggaGAATTTCTGTCTGTTAAAAAGccattttgtgggggaaaactatttctgattggctggacctggctgcccaccaagtgaaatccatagattaggtacAAATGTACTTATTTAAATTgtctgatttccttatgtgaactgtaactcagcaacatatttgaaattgttgcatgttgcgttttttttgttcagtatagatgtgCCACCAACTGTAGTaagatactgtatattacagaCTTTAAGTGATACCTTTGGTCAATGTTTACATGTGAGGAACAGTAAAGAGATGTGTGTTTGCGTGTTGATTTCATTTTTTACAGTTCAATGTCCTTTTGATCAGACAGTCCATATTTAAGACGTGAAAGATGAAAACGATCGTTGAATAAAACCAAGACATATAGAAATGTTTTTATGTCATGTTTATAATCATTCAAGGTTTGGATTTGCCAGAATACAATAATCAACCTAATAGAAACATTATGAAAATGAAACATTCCATCAGAATACATCTGCAGTCTGTACAAAACACACCAAAATTAAATTAAAAGTTTAATTAAAATACAAACCTCTTTAATTTTCATAGTTCTGCATAAACATTATTTTATATAAAAACCCTTATGTCTTTTAAAACGTCATTAATCATttgtaaaatacaaaaataaacccTGTTCCCATCTTAGGAGCTGCTGCTTGTGTTACTCTCCTCTGTAGTCTCCCACTCTCCATATCCCTCATacacctctccttccccc

Function

NR:

description
testis-expressed protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956015.1 True 4656 mRNA 0.51 12 22841268 22865328
Loading

Neighbor

gene id symbol gene type direction distance location
bricd5 LOC106589562 coding upstream 92369 22744224 ~ 22748899 (+)
pgp pgp coding upstream 97282 22741022 ~ 22743986 (+)
zdhhc4 zdhhc4 coding upstream 102745 22731330 ~ 22738523 (+)
arhgap17a arhgap17 coding upstream 149544 22642425 ~ 22691724 (+)
LOC110499168 LOC106589557 coding upstream 239727 22600486 ~ 22601541 (+)
LOC110499186 LOC106589571 coding downstream 48794 22914122 ~ 22916645 (+)
LOC110499185 LOC106589570 coding downstream 53556 22918884 ~ 22938915 (+)
baiap2l1a LOC106589578 coding downstream 338435 23203763 ~ 23252161 (+)
LOC110499192 LOC106589579 coding downstream 387472 23252800 ~ 23269058 (+)
LOC110499196 prvt coding downstream 426703 23292031 ~ 23293827 (+)
G1674848 NA non-coding upstream 8928 22832119 ~ 22832340 (+)
G1674840 NA non-coding upstream 12472 22828567 ~ 22828796 (+)
G1674625 NA non-coding upstream 75836 22749085 ~ 22765432 (+)
G1674664 LOC106609649 non-coding upstream 134999 22705560 ~ 22706269 (+)
G1674659 NA non-coding upstream 142124 22698933 ~ 22699144 (+)
G1674881 NA non-coding downstream 73981 22939309 ~ 22940706 (+)
G1674902 NA non-coding downstream 85058 22950386 ~ 22952493 (+)
G1674912 NA non-coding downstream 103812 22969140 ~ 22969575 (+)
G1674940 NA non-coding downstream 136257 23001585 ~ 23005692 (+)
G1674946 NA non-coding downstream 144416 23009744 ~ 23010909 (+)
LOC110513322 rsl1d1 other upstream 881641 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 995402 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 1390922 21444883 ~ 21450346 (+)
LOC110499100 LOC106589528 other upstream 1403887 21422168 ~ 21437402 (+)
G1673204 NA other upstream 1451490 21386329 ~ 21389778 (+)
faap100 faap100 other downstream 714702 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 2217336 25082664 ~ 25083277 (+)
G1677738 NA other downstream 2771363 25636691 ~ 25641614 (+)
G1678963 NA other downstream 3596866 26462194 ~ 26467953 (+)

Expression

tex2l(LOC106589568) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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tex2l(LOC106589568) Expression in each Bioproject

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tex2l(LOC106589568) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 400.
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Co-expression Network