Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110499195 |
| gene name | LOC106609864 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 23294737 ~ 23297531 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: parvalbumin beta 3-like |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021576165.2 | True | 733 | mRNA | 0.46 | 5 | 23294737 | 23297531 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499196 | prvt | coding | upstream | 910 | 23292031 ~ 23293827 (+) |
| LOC110499192 | LOC106589579 | coding | upstream | 25679 | 23252800 ~ 23269058 (+) |
| baiap2l1a | LOC106589578 | coding | upstream | 42576 | 23203763 ~ 23252161 (+) |
| LOC110499185 | LOC106589570 | coding | upstream | 355822 | 22918884 ~ 22938915 (+) |
| LOC110499186 | LOC106589571 | coding | upstream | 378092 | 22914122 ~ 22916645 (+) |
| pvalb2 | pvalb2 | coding | downstream | 4162 | 23301693 ~ 23303981 (+) |
| pvalb9 | LOC106589582 | coding | downstream | 11417 | 23308948 ~ 23313989 (+) |
| ccz1 | ccz1 | coding | downstream | 19337 | 23316868 ~ 23332111 (+) |
| dlgap5 | dlgap5 | coding | downstream | 35890 | 23333421 ~ 23350557 (+) |
| eif2ak1 | NA | coding | downstream | 70462 | 23367993 ~ 23376296 (+) |
| G1675016 | NA | non-coding | upstream | 177301 | 23115161 ~ 23117436 (+) |
| G1674951 | NA | non-coding | upstream | 277990 | 23016200 ~ 23016747 (+) |
| G1674946 | NA | non-coding | upstream | 283828 | 23009744 ~ 23010909 (+) |
| G1674940 | NA | non-coding | upstream | 289045 | 23001585 ~ 23005692 (+) |
| G1675189 | NA | non-coding | downstream | 120604 | 23418135 ~ 23418386 (+) |
| G1675191 | NA | non-coding | downstream | 123855 | 23421386 ~ 23421612 (+) |
| G1675195 | cyth3 | non-coding | downstream | 139814 | 23437345 ~ 23443412 (+) |
| G1675209 | NA | non-coding | downstream | 161801 | 23459332 ~ 23465663 (+) |
| faap100 | faap100 | non-coding | downstream | 282606 | 23576429 ~ 23582556 (+) |
| LOC110513322 | rsl1d1 | other | upstream | 1335110 | 21936590 ~ 21959627 (+) |
| tnrc6b | LOC106589538 | other | upstream | 1448871 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 1844391 | 21444883 ~ 21450346 (+) |
| LOC110499100 | LOC106589528 | other | upstream | 1857356 | 21422168 ~ 21437402 (+) |
| G1677419 | LOC100194703 | other | downstream | 1785133 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 2339160 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 3164663 | 26462194 ~ 26467953 (+) |
| LOC110499256 | LOC106589642 | other | downstream | 3334604 | 26632095 ~ 26639269 (+) |
