slc16a3 (LOC106610249)


Basic Information

Item Value
gene id slc16a3
gene name LOC106610249
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 24146065 ~ 24169492 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956059.1
ACGCTGCAATATgcagcgttcaaaacaactgggaactcggaattAGACATTTCCGACCTCAGGAATTAGACATTTCCGACCTCAGTGCGTTCAAAAAAAAAcagggaactcggaaaaaaactagttccgactgggaaaaatgtgttttaacggtcatccaactcggaattccaactccGGAAtttgggcctctttctagagctcatGGCGTCATTATTTGACCTTGTATATATGTTcgtgttcccagttgttttgaacttgGCATTAGTCACCGCAAATGGGTTTCCAGAAAATCGCAGCCGTGCCGAAATAAATTCTCACATGAGGAGGCGTGGACGCATGGTCCAGACCAGAAGACGTTACAGACAAAGCTTCGTCAGGTAAGAACaacagttcTGACCCAAGTTGACGGAACAGACGGTTGAGGGAATCTCCTAGCAGAGAGGATCATGGGAGGAGCCGTGGTAGATGATGAGCCTAGTGATGTCAAGGCACCAGATGGAGGGTGGGGCTGGGCAGTGCTCGCCGGGGGGTTCGTCATCACTGGGTTCTCCTACGCCTTCCCCAAGGCCGTCAGTGTGTTCTTCAAGGAGTTGATCAGGGAGTTCGGAGTGGGATACAGCGACTGTGCATGGATTTCTTCTATACTGTTGGCCATGCTCTACGGCAcaggtccaCTGTGCAGTGTGCTGGTGAACAAGTTTGGGTGTCGGCCAGTGATGATGGTGGGAGGGCTCTTTGCCTCCTTGGGAATGGTCCTGGCCTCCTTGGCCACCAGTATCATACACATCTACATCTGTACTGGAGTTATAACAGGTCTTGGCCTGGCGCTGAACTTCCAGCCATCTTTGATCATGCTGAATCGTTACTTTAGTGAGAAGAGGCCTCTAGCTAATGGACTATCTGCTGCTGGGAGCCCTGTGGCActctgctgcctctctcctctGGGACAGGTGCTGCAGTACCACTATGGCTGGAGAGGCGGCTTCCTTATCCTGGGGGGCCTGCTGCTCAACTGCTGTGCCTGTGGGGCCCTGATGAGGCCCCTGGTGGGCCCCAAGAAGCCCCAGGACCAGGAGTTGCAGGCTGTGGGTGAAGCAGAAAGAAAGCTCAAGCCTAAGAAAAAGCTCCTGGATTTTAGTGTATTTAAAGACAGAGGTTTCCTCATCTATGCCATAGCTGCATCCATCATGGTACTGGGCCTTTTTGTGCCGCCCGTGTTTGTGGTGAGCTATGCCAAGGAGATGGGGAATGAAGACACCAAGTCTGCCCTCCTCCTCACCATCCTGGGGTTCATTGATATCTTCGCCCGCCCCACATGTGGGCTGATTGCGGGGATGAAGTGGGTCCGGCCTAGATGTGTGTATCTCTTCAGCTTCGCCATACTCTTTAATGGCATTACCGATGTGATCAGCTCACAGGCGACAGACTACCCTGGTCTGGTGGTGTTCTGTATCTTCTTCGGGCTCTCTTACGGGATGGTGGGGGCGCTGCAGTTCGAGGTTCTCATGGCCATCGTGGGCACAAAGAAGTTCTCCAGCGCTTTAGGGCTGGTGTTGCTCATGGAGGCTATCGCTGTGCTGGTGGGCCCGCCTGGAGCAGGTCGTCTGCTGGACGCCACACATAACTACATGTACGTGTTCCTGCTGGCTGGCTGTGAGGTCATTCTGGCCTCCATCGTCATCTGCATGGGCAACTTCCTGTGCATCAAGAAGAAGCCAGATGAGCCTGAAGCCCATTTAAAGAATGGAGCCCCCGTAGAGATGGAGAAGCTCAACAGCCTGCTGGAGGCGGAGGGAGGAGAGCATGAGAGGGCGCAGCCGGCGGGGGTGAGGGGTGGCGCCGCAGAGGCAAAATAGGGAGTGGAAAAGAATGGAGGGGTGGGAAACCCAGAGACAGCTCTGTGATGGAAAGAGAAGGGATATTTGTTAATTGATTTTTAGAGACTGACAAGCTTTTATTAAACACTACCAATAGGGACGAACATAAGAATACACACACTGgcggagggagggatgaagagaaggaTGAATTGCATTGTGCTGTGTTGTATGCTTTAATatacacagcaaattggccagtgttacctACTGTTTTTTCAGGGTAACATTTCTGTTTTGATTCTGGAGTAAAATTAACTCTAAGGGTTAAATTGACACTGAGTGGTGTAATAGGACCCCAGTGTCTGTTAATAACCGATGTTAACCAAAACCACAGCCATCATGTTTCCCAGCATGCTCAATGCAGGTgatttcaaaatatatatttttttgtgggcagagaggggaggggggtttGATTGTACATTGATTAATGTTGTGCTACTCAAATATAAattccatacatttttctaaactaatctaaTGTGTTACTTGGATGTATTGCACacattactgaaatggttgtccaGTTTAAATGCATTCGATACTCTCATATTTTAGTCTTcccaaccctggcagtcattctgaataaAAGTTGAGTGAATACAAA
>XM_036956060.1
ACGCTGCAATATgcagcgttcaaaacaactgggaactcggaattAGACATTTCCGACCTCAGGAATTAGACATTTCCGACCTCAGTGCGTTCAAAAAAAAAcagggaactcggaaaaaaactagttccgactgggaaaaatgtgttttaacggtcatccaactcggaattccaactccGGAAtttgggcctctttctagagctcatGGCGTCATTATTTGACCTTGTATATATGTTcgtgttcccagttgttttgaacttgGCATTAGTCACCGCAAATGGGTTTCCAGAAAATCGCAGCCGTGCCGAAATAAATTCTCACATGAGGAGGCGTGGACGCATGGTCCAGACCAGAAGACGTTACAGACAAAGCTTCGTCAGTATTGGGACCTGGTCCGGGGTGAGCAGTATGTCCTATACCGCAGACTCATTGCAGTAGAAATCTTCATCCAGATCAAGttcTGACCCAAGTTGACGGAACAGACGGTTGAGGGAATCTCCTAGCAGAGAGGATCATGGGAGGAGCCGTGGTAGATGATGAGCCTAGTGATGTCAAGGCACCAGATGGAGGGTGGGGCTGGGCAGTGCTCGCCGGGGGGTTCGTCATCACTGGGTTCTCCTACGCCTTCCCCAAGGCCGTCAGTGTGTTCTTCAAGGAGTTGATCAGGGAGTTCGGAGTGGGATACAGCGACTGTGCATGGATTTCTTCTATACTGTTGGCCATGCTCTACGGCAcaggtccaCTGTGCAGTGTGCTGGTGAACAAGTTTGGGTGTCGGCCAGTGATGATGGTGGGAGGGCTCTTTGCCTCCTTGGGAATGGTCCTGGCCTCCTTGGCCACCAGTATCATACACATCTACATCTGTACTGGAGTTATAACAGGTCTTGGCCTGGCGCTGAACTTCCAGCCATCTTTGATCATGCTGAATCGTTACTTTAGTGAGAAGAGGCCTCTAGCTAATGGACTATCTGCTGCTGGGAGCCCTGTGGCActctgctgcctctctcctctGGGACAGGTGCTGCAGTACCACTATGGCTGGAGAGGCGGCTTCCTTATCCTGGGGGGCCTGCTGCTCAACTGCTGTGCCTGTGGGGCCCTGATGAGGCCCCTGGTGGGCCCCAAGAAGCCCCAGGACCAGGAGTTGCAGGCTGTGGGTGAAGCAGAAAGAAAGCTCAAGCCTAAGAAAAAGCTCCTGGATTTTAGTGTATTTAAAGACAGAGGTTTCCTCATCTATGCCATAGCTGCATCCATCATGGTACTGGGCCTTTTTGTGCCGCCCGTGTTTGTGGTGAGCTATGCCAAGGAGATGGGGAATGAAGACACCAAGTCTGCCCTCCTCCTCACCATCCTGGGGTTCATTGATATCTTCGCCCGCCCCACATGTGGGCTGATTGCGGGGATGAAGTGGGTCCGGCCTAGATGTGTGTATCTCTTCAGCTTCGCCATACTCTTTAATGGCATTACCGATGTGATCAGCTCACAGGCGACAGACTACCCTGGTCTGGTGGTGTTCTGTATCTTCTTCGGGCTCTCTTACGGGATGGTGGGGGCGCTGCAGTTCGAGGTTCTCATGGCCATCGTGGGCACAAAGAAGTTCTCCAGCGCTTTAGGGCTGGTGTTGCTCATGGAGGCTATCGCTGTGCTGGTGGGCCCGCCTGGAGCAGGTCGTCTGCTGGACGCCACACATAACTACATGTACGTGTTCCTGCTGGCTGGCTGTGAGGTCATTCTGGCCTCCATCGTCATCTGCATGGGCAACTTCCTGTGCATCAAGAAGAAGCCAGATGAGCCTGAAGCCCATTTAAAGAATGGAGCCCCCGTAGAGATGGAGAAGCTCAACAGCCTGCTGGAGGCGGAGGGAGGAGAGCATGAGAGGGCGCAGCCGGCGGGGGTGAGGGGTGGCGCCGCAGAGGCAAAATAGGGAGTGGAAAAGAATGGAGGGGTGGGAAACCCAGAGACAGCTCTGTGATGGAAAGAGAAGGGATATTTGTTAATTGATTTTTAGAGACTGACAAGCTTTTATTAAACACTACCAATAGGGACGAACATAAGAATACACACACTGgcggagggagggatgaagagaaggaTGAATTGCATTGTGCTGTGTTGTATGCTTTAATatacacagcaaattggccagtgttacctACTGTTTTTTCAGGGTAACATTTCTGTTTTGATTCTGGAGTAAAATTAACTCTAAGGGTTAAATTGACACTGAGTGGTGTAATAGGACCCCAGTGTCTGTTAATAACCGATGTTAACCAAAACCACAGCCATCATGTTTCCCAGCATGCTCAATGCAGGTgatttcaaaatatatatttttttgtgggcagagaggggaggggggtttGATTGTACATTGATTAATGTTGTGCTACTCAAATATAAattccatacatttttctaaactaatctaaTGTGTTACTTGGATGTATTGCACacattactgaaatggttgtccaGTTTAAATGCATTCGATACTCTCATATTTTAGTCTTcccaaccctggcagtcattctgaataaAAGTTGAGTGAATACAAA
>XM_036956058.1
GCTGCAATATgcagcgttcaaaacaactgggaactcggaattAGACATTTCCGACCTCAGGAATTAGACATTTCCGACCTCAGTGCGTTCAAAAAAAAAcagggaactcggaaaaaaactagttccgactgggaaaaatgtgttttaacggtcatccaactcggaattccaactccGGAAtttgggcctctttctagagctcatGGCGTCATTATTTGACCTTGTATATATGTTcgtgttcccagttgttttgaacttgGCATTAGTCACCGCAAATGGGTTTCCAGAAAATCGCAGCCGTGCCGAAATAAATTCTCACATGAGGAGGCGTGGACGCATGGTCCAGACCAGAAGACGTTACAGACAAAGCTTCGTCAGttcTGACCCAAGTTGACGGAACAGACGGTTGAGGGAATCTCCTAGCAGAGAGGATCATGGGAGGAGCCGTGGTAGATGATGAGCCTAGTGATGTCAAGGCACCAGATGGAGGGTGGGGCTGGGCAGTGCTCGCCGGGGGGTTCGTCATCACTGGGTTCTCCTACGCCTTCCCCAAGGCCGTCAGTGTGTTCTTCAAGGAGTTGATCAGGGAGTTCGGAGTGGGATACAGCGACTGTGCATGGATTTCTTCTATACTGTTGGCCATGCTCTACGGCAcaggtccaCTGTGCAGTGTGCTGGTGAACAAGTTTGGGTGTCGGCCAGTGATGATGGTGGGAGGGCTCTTTGCCTCCTTGGGAATGGTCCTGGCCTCCTTGGCCACCAGTATCATACACATCTACATCTGTACTGGAGTTATAACAGGTCTTGGCCTGGCGCTGAACTTCCAGCCATCTTTGATCATGCTGAATCGTTACTTTAGTGAGAAGAGGCCTCTAGCTAATGGACTATCTGCTGCTGGGAGCCCTGTGGCActctgctgcctctctcctctGGGACAGGTGCTGCAGTACCACTATGGCTGGAGAGGCGGCTTCCTTATCCTGGGGGGCCTGCTGCTCAACTGCTGTGCCTGTGGGGCCCTGATGAGGCCCCTGGTGGGCCCCAAGAAGCCCCAGGACCAGGAGTTGCAGGCTGTGGGTGAAGCAGAAAGAAAGCTCAAGCCTAAGAAAAAGCTCCTGGATTTTAGTGTATTTAAAGACAGAGGTTTCCTCATCTATGCCATAGCTGCATCCATCATGGTACTGGGCCTTTTTGTGCCGCCCGTGTTTGTGGTGAGCTATGCCAAGGAGATGGGGAATGAAGACACCAAGTCTGCCCTCCTCCTCACCATCCTGGGGTTCATTGATATCTTCGCCCGCCCCACATGTGGGCTGATTGCGGGGATGAAGTGGGTCCGGCCTAGATGTGTGTATCTCTTCAGCTTCGCCATACTCTTTAATGGCATTACCGATGTGATCAGCTCACAGGCGACAGACTACCCTGGTCTGGTGGTGTTCTGTATCTTCTTCGGGCTCTCTTACGGGATGGTGGGGGCGCTGCAGTTCGAGGTTCTCATGGCCATCGTGGGCACAAAGAAGTTCTCCAGCGCTTTAGGGCTGGTGTTGCTCATGGAGGCTATCGCTGTGCTGGTGGGCCCGCCTGGAGCAGGTCGTCTGCTGGACGCCACACATAACTACATGTACGTGTTCCTGCTGGCTGGCTGTGAGGTCATTCTGGCCTCCATCGTCATCTGCATGGGCAACTTCCTGTGCATCAAGAAGAAGCCAGATGAGCCTGAAGCCCATTTAAAGAATGGAGCCCCCGTAGAGATGGAGAAGCTCAACAGCCTGCTGGAGGCGGAGGGAGGAGAGCATGAGAGGGCGCAGCCGGCGGGGGTGAGGGGTGGCGCCGCAGAGGCAAAATAGGGAGTGGAAAAGAATGGAGGGGTGGGAAACCCAGAGACAGCTCTGTGATGGAAAGAGAAGGGATATTTGTTAATTGATTTTTAGAGACTGACAAGCTTTTATTAAACACTACCAATAGGGACGAACATAAGAATACACACACTGgcggagggagggatgaagagaaggaTGAATTGCATTGTGCTGTGTTGTATGCTTTAATatacacagcaaattggccagtgttacctACTGTTTTTTCAGGGTAACATTTCTGTTTTGATTCTGGAGTAAAATTAACTCTAAGGGTTAAATTGACACTGAGTGGTGTAATAGGACCCCAGTGTCTGTTAATAACCGATGTTAACCAAAACCACAGCCATCATGTTTCCCAGCATGCTCAATGCAGGTgatttcaaaatatatatttttttgtgggcagagaggggaggggggtttGATTGTACATTGATTAATGTTGTGCTACTCAAATATAAattccatacatttttctaaactaatctaaTGTGTTACTTGGATGTATTGCACacattactgaaatggttgtccaGTTTAAATGCATTCGATACTCTCATATTTTAGTCTTcccaaccctggcagtcattctgaataaAAGTTGAGTGAATACAAA

Function

NR:

description
monocarboxylate transporter 4

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0015718 monocarboxylic acid transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015355 secondary active monocarboxylate transmembrane transporter activity molecular_function

KEGG:

id description
K08180 SLC16A3; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956059.1 False 2490 mRNA 0.50 7 24146065 24169492
XM_036956060.1 False 2555 mRNA 0.50 8 24146065 24169492
XM_036956058.1 True 2475 mRNA 0.50 7 24146067 24169492

Neighbor

gene id symbol gene type direction distance location
LOC110499226 gps1 coding upstream 117184 24020687 ~ 24090566 (+)
LOC110499218 rac3 coding upstream 168610 23972492 ~ 23977455 (+)
lrrc45 lrrc45 coding upstream 181607 23946660 ~ 23964458 (+)
prkar1ab prkar1a coding upstream 240250 23894637 ~ 23905815 (+)
LOC110499210 arsg coding upstream 258645 23870490 ~ 23887420 (+)
LOC118942055 NA coding downstream 14067 24183559 ~ 24189459 (+)
LOC110499595 NA coding downstream 460051 24629543 ~ 24632101 (+)
sdk2b sdk2 coding downstream 723438 24892930 ~ 25354425 (+)
cdc42ep4b cdc42ep4 coding downstream 1195323 25364815 ~ 25392592 (+)
si:ch211-216b21.2 LOC106589629 coding downstream 1833780 26003272 ~ 26050911 (+)
G1675556 NA non-coding upstream 62884 24082350 ~ 24083181 (+)
G1675497 NA non-coding upstream 146134 23997052 ~ 23999931 (+)
G1675490 NA non-coding upstream 165978 23979883 ~ 23980087 (+)
G1675489 NA non-coding upstream 166439 23979411 ~ 23979626 (+)
G1675586 csnk1d non-coding downstream 9457 24178949 ~ 24179418 (+)
G1675585 csnk1d non-coding downstream 10867 24180359 ~ 24186488 (+)
G1675662 NA non-coding downstream 71875 24241367 ~ 24241730 (+)
G1676609 NA non-coding downstream 234960 24404452 ~ 24404811 (+)
G1676610 NA non-coding downstream 235452 24404944 ~ 24405223 (+)
faap100 faap100 other upstream 564633 23576429 ~ 23582556 (+)
LOC110499192 LOC106589579 other upstream 887996 23252800 ~ 23269058 (+)
LOC110513322 rsl1d1 other upstream 2186438 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 2300199 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 2695719 21444883 ~ 21450346 (+)
G1677419 LOC100194703 other downstream 913172 25082664 ~ 25083277 (+)
G1677738 NA other downstream 1467199 25636691 ~ 25641614 (+)
G1678963 NA other downstream 2292702 26462194 ~ 26467953 (+)
LOC110499256 LOC106589642 other downstream 2462643 26632095 ~ 26639269 (+)
LOC110499259 LOC106589644 other downstream 2485135 26654584 ~ 26656111 (+)

Expression


Co-expression Network