Gene
RNA
| Item | Value |
|---|---|
| gene id | trnag-ccc-5 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 26229876 ~ 26229946 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnag-ccc-5 | True | 71 | mRNA | 0.61 | 1 | 26229876 | 26229946 |
26,226,800
26,227,000
26,227,200
26,227,400
26,227,600
26,227,800
26,228,000
26,228,200
26,228,400
26,228,600
26,228,800
26,229,000
26,229,200
26,229,400
26,229,600
26,229,800
26,230,000
26,230,200
26,230,400
26,230,600
26,230,800
26,231,000
NC_048584.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fbxw10 | cdrt1 | coding | downstream | 852 | 26208532 ~ 26229024 (-) |
| LOC110499245 | LOC106589628 | coding | downstream | 311440 | 25841005 ~ 25918436 (-) |
| hs3st3b1b | LOC106589627 | coding | downstream | 393546 | 25807975 ~ 25836330 (-) |
| LOC118942473 | NA | coding | downstream | 624454 | 25605370 ~ 25605422 (-) |
| tekt3 | tekt3 | coding | downstream | 740247 | 25459179 ~ 25489629 (-) |
| LOC110499248 | LOC100380747 | coding | upstream | 4964 | 26234910 ~ 26261384 (-) |
| col1a1b | col1a3 | coding | upstream | 46208 | 26276154 ~ 26298481 (-) |
| si:ch1073-13h15.3 | LOC107387676 | coding | upstream | 130244 | 26360190 ~ 26365511 (-) |
| gngt2b | NA | coding | upstream | 143697 | 26373643 ~ 26383422 (-) |
| lsm12b | lsm12 | coding | upstream | 170191 | 26400137 ~ 26404966 (-) |
| G1678754 | NA | non-coding | downstream | 98752 | 26130851 ~ 26131124 (-) |
| G1678726 | NA | non-coding | downstream | 117333 | 26112284 ~ 26112543 (-) |
| G1678710 | NA | non-coding | downstream | 126634 | 26102760 ~ 26103242 (-) |
| G1678704 | LOC106613431 | non-coding | downstream | 130736 | 26098724 ~ 26099140 (-) |
| G1679340 | NA | non-coding | upstream | 231 | 26230177 ~ 26230925 (-) |
| G1679346 | LOC105030512 | non-coding | upstream | 11353 | 26241299 ~ 26241615 (-) |
| G1679363 | NA | non-coding | upstream | 32158 | 26262104 ~ 26263203 (-) |
| G1679384 | NA | non-coding | upstream | 82062 | 26312008 ~ 26312245 (-) |
| G1679397 | NA | non-coding | upstream | 100556 | 26330502 ~ 26330793 (-) |
| G1678462 | NA | other | downstream | 524752 | 25704621 ~ 25705124 (-) |
| G1678242 | cdc42ep4 | other | downstream | 837300 | 25387881 ~ 25392576 (-) |
| G1677008 | NA | other | downstream | 1519378 | 24710125 ~ 24710498 (-) |
| G1676904 | NA | other | downstream | 1591175 | 24638343 ~ 24638701 (-) |
| G1680017 | NA | other | upstream | 814836 | 27044782 ~ 27045294 (-) |
| G1680171 | cog2 | other | upstream | 1050877 | 27280823 ~ 27283995 (-) |
| sf3b5 | sf3b5 | other | upstream | 1152039 | 27381985 ~ 27384608 (-) |
| LOC110499285 | olig3 | other | upstream | 1519607 | 27748849 ~ 27750461 (-) |
