gngt2b


Basic Information

Item Value
gene id gngt2b
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 26373643 ~ 26383422 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576261.2
TCCTGTACCGACCTCTCCCCAAAGCAAAGCCTACCTGGATCAGCTTTGCAGCTGGAGAGGGGTGAGGCGAAGACCCATCAGCAAGTCAGTCAATGCAGTTACTGTCTATCAGAAAGCAGCTTACAATAGCCAAGCCCCTAGGAGCTAAGACTCTCTCTGTTGGATACCCACCATTCAACAGGCAAGATGGCTCGTGATATGTCTGATAAGGAAATCCTGCAAATGGAGCTGGCTCAGCTAAAGATTGAAGTTAGCACAACACGCACAGCTGTGTCAGTCAATTGCAAGGAGACAATGGAATGGGTGGAGGCACAAACAGAGGGCGACCCACTCATAAAGGGCGTGTCAGATGACAAGAACCCCTACAAGGGAGACAAGGGAGGCTGCATTATAACCTAGAATACACAAACCCAGGGAAAAGAAGCCACACATTTTGATTTAATGAGAAACAGTGGAGGGCATTCAAACACATATGTAATCTGATATttggacagacagatagacagctcAGAGACAAGGACAACTACAACATTTGTGTTGATGCTGTATTGTTACAAGATGCCAGATTTCCCTTTTCCCCATCTCTGGATATTTTCTGTTGATATCATTGTGTCTCTGTCAAATTGTAAATAAACACATCTAGGTGTGTAAGGCTGTTACCTAGCTCATCTTGTGGTGTTATTCACTTTACTCTGCTAAATTAAAAGCACCTTCATTGT
>XM_021576262.2
TTCACGAGCAGCACCGCATGCGCACGTCCAAGCGGATCACATAAATTGTCTGGTTTGTCgactgcatgaactttacaaaaaCCATGTCAAATGCCATGAAGTTGACTGCAAGTTTCTGCAGTTGCTCTTCACCAAATTCACCCTGCAGCCATTTCCTGCATTGTAGGAGGCTCTATAAAAACGGCACAGTGGACACATCATAATACCCACAAAACTTAGCGGCAAGATGGCTCGTGATATGTCTGATAAGGAAATCCTGCAAATGGAGCTGGCTCAGCTAAAGATTGAAGTTAGCACAACACGCACAGCTGTGTCAGTCAATTGCAAGGAGACAATGGAATGGGTGGAGGCACAAACAGAGGGCGACCCACTCATAAAGGGCGTGTCAGATGACAAGAACCCCTACAAGGGAGACAAGGGAGGCTGCATTATAACCTAGAATACACAAACCCAGGGAAAAGAAGCCACACATTTTGATTTAATGAGAAACAGTGGAGGGCATTCAAACACATATGTAATCTGATATttggacagacagatagacagctcAGAGACAAGGACAACTACAACATTTGTGTTGATGCTGTATTGTTACAAGATGCCAGATTTCCCTTTTCCCCATCTCTGGATATTTTCTGTTGATATCATTGTGTCTCTGTCAAATTGTAAATAAACACATCTAGGTGTGTAAGGCTGTTACCTAGCTCATCTTGTGGTGTTATTCACTTTACTCTGCTAAATTAAAAGCACCTTCATTGT
>TU1921196
TTTGCAGCTGGAGAGGGGTGAGGCGAAGACCCATCAGCAAGTCAGTCAATGCAGTTACTGTCTATCAGAAAGCAGCTTACAATAGCCAAGCCCCTAGGAGCTAAGACTCTCTCTGTTGGATACCCACCATTCAACAGGCAAGATGGCTCGTGATATGTCTGATAAGGAAATCCTGCAAATGGAGCTGGCTCAGCTAAAGATTGAAGTTAGCACAACACGCACAGCTGTGTCAGTCAATTGCAAGGAGACAATGGAATGGGTGGAGGCACAAACAGAGGGCGACCCACTCATAAAGGGCGTGTCAGATGACAAGAACCCCTACAAGGGAGACAAGGGAGGCTGCATTATAACCTAGAATACACAAACCCAGGGAAAAGAAGCCACACATTTTGATTTAATGAGAAACAGTGGAGGGCATTCAAACACATATGTAATCTGATATttggacagacagatagacagctcAGAGACAAGGACAACTACAACATTTGTGTTGATGCTGTATTGTTACAAGATGCCAGATTTCCCTTTTCCCCATCTCTGGATATTTTCTGTTGATATCATTGTGTCTCTGTCAAATTGTAAATAAACACATCTAGGTGTGTAAGGCTGTTACCTAGCTCATCTTGTGGTGTTATTCACTTTACTCTGCTAAATTAAAAGCACCTTCATTGT

Function

NR:

description
Guanine nucleotide-binding protein GI/GS/GO subunit gamma-T2

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576261.2 False 719 mRNA 0.44 3 26373643 26375202
XM_021576262.2 False 759 mRNA 0.43 3 26373643 26383422
TU1921196 True 675 lncRNA 0.44 3 26373643 26375158

Neighbor

gene id symbol gene type direction distance location
si:ch1073-13h15.3 LOC107387676 coding downstream 8132 26360190 ~ 26365511 (-)
col1a1b col1a3 coding downstream 75162 26276154 ~ 26298481 (-)
LOC110499248 LOC100380747 coding downstream 112259 26234910 ~ 26261384 (-)
trnag-ccc-5 NA coding downstream 143697 26229876 ~ 26229946 (-)
fbxw10 cdrt1 coding downstream 144619 26208532 ~ 26229024 (-)
lsm12b lsm12 coding upstream 16715 26400137 ~ 26404966 (-)
tanc2b LOC106589639 coding upstream 26051 26409473 ~ 26629846 (-)
cntd1 cntd1 coding upstream 255361 26638783 ~ 26654541 (-)
wnk4a wnk4 coding upstream 272595 26655356 ~ 26732426 (-)
vps25 vps25 coding upstream 350549 26733971 ~ 26737726 (-)
G1679408 NA non-coding downstream 29143 26344295 ~ 26344500 (-)
G1679403 NA non-coding downstream 32694 26340578 ~ 26340949 (-)
G1679402 NA non-coding downstream 34815 26338581 ~ 26338828 (-)
G1679397 NA non-coding downstream 42850 26330502 ~ 26330793 (-)
G1679384 NA non-coding downstream 61398 26312008 ~ 26312245 (-)
G1679553 NA non-coding upstream 159071 26542493 ~ 26542787 (-)
G1679562 LOC108238713 non-coding upstream 180544 26563966 ~ 26564368 (-)
G1679566 NA non-coding upstream 185645 26569067 ~ 26569277 (-)
G1679568 NA non-coding upstream 190163 26573585 ~ 26573999 (-)
G1679569 NA non-coding upstream 191041 26574463 ~ 26574685 (-)
G1678462 NA other downstream 668519 25704621 ~ 25705124 (-)
G1678242 cdc42ep4 other downstream 981067 25387881 ~ 25392576 (-)
G1677008 NA other downstream 1663145 24710125 ~ 24710498 (-)
G1680017 NA other upstream 661360 27044782 ~ 27045294 (-)
G1680171 cog2 other upstream 897401 27280823 ~ 27283995 (-)
sf3b5 sf3b5 other upstream 998563 27381985 ~ 27384608 (-)
LOC110499285 olig3 other upstream 1366131 27748849 ~ 27750461 (-)
fa36a fa36a other upstream 1477319 27860741 ~ 27864828 (-)

Expression

gngt2b Expression in all Baseline Samples

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gngt2b Expression in each Bioproject

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gngt2b Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 60000.
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Co-expression Network