tmem101 (tmem101)


Basic Information

Item Value
gene id tmem101
gene name tmem101
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 26383505 ~ 26388284 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576260.2
TGTAAAGTTTTTGCCCACTGCTGACGTAACACTGTAGTAACAATAATGGCTGCCCCTAGCAGTAGGCAAGTTCTCCGGCGCCTCTGTCAATTTGGCGCCTTTATTTTGACGCGATTTGGTTTCTGGAACTGCTTTACAATGCTGATGCTCTTTGCGGAGCGCGCGGATGTAAAAAGGAAACCTGACATCCAGGTTCCCTACTTGTACTTTGACATGGGGGTATCAGTTCTTTGTGCCAGCTTCATGTCCTTTGGGGTGAAGAGGAGGTGGTTTGCACTAGGGGCCGCCATACAGTTAGCTATCAGCACCTACGCTTCTTATATTGGTGAACAAGTGCACTATAGTGACTGGCTGAAGGTAAGGATGCACTCCAGAACCCTGGCTATCATCGGGGGTTTCCTGGTCCTAGCCAGTGGTGCGGGGGAGGTATACAGACAGAAACATCGCACCAGATCGCTGCAGTCCACCGGACAGGTCTTCATAGGGGTCTACCTCATCTGTATGGTGTACTCCCTCCAGCACAGTAAAGAGGACAGGATGGCCTACCTGAACCACATCCCTGGTGGGGAGATCACCCTAATGCTACTGGTGGTGCTGTTTGGAGTGCTGGCCCTGGCCTTCCTCTCTGGCTGTTATATCCGTCTAGCTTCACAGATCCTGGCAGTGGTCCTGCCCCTCATCCTGCTCTTCATCGACGGTAACCTGGGCTACTGGCACAACACACGCCATGTAGAGTTCTGGAACCAGTTGAAGCTGATGGGGCATAACGTGGGTATTTTCGGGGCTGTGCTGATTCTGGCTACAGATGGTTGAATGGAATGGACACCTTGGCAGACTATCAGAAGAGAGGCCAATACTTAACATGTGACTGAAGCTACATTTAgtgtttcaaatggcaccctattccctatatattgcactacttttgaccaaagcttTGGCCAAAAGTAATGCaatatattgggaatagggtgccacctggtcaaaagtagtgcactatattgggaataaggtgccatgtGAGACTTATACAGTCTTTCTGGATCCTCAGATGAACTGATCCTCACTTACAGCAGGAGATAAATGGTGATTGGACGCTAATCCCTGCCTGACAGACAGCCATGTGGGTAGACCTTATCGTTAACTACCTGTCCAACTTTGCTTCTGCAGAAAATAGATATGAGCCCTgttgagttttttttattttatactgaacaaaaatacataaCGCAACAATGAACTATTTTACAGTTCATAaataaggaaatcggtcaattcaaataaataaattaggccctaacctatggatttcacaaaagggctttattacagacaaatacTCCGTTTcaacagctgtctgggtggctggtctcagatgatcccgcaggtgaagaagccggatgtggaggtcctgggctggcatggttacacgtgggtCTGCGGTTGTGTGGCCCGTTGGacgtacagccaaattctctgaaacgatgttggaggtggcttatggaagggaaatgaacattaaattatctggaaagagctctagtggacattcctgtagtcagcatgccaattgcacgctccctcaaaacttgagacatttgtggcattgttgtgtgacaaaactgcacatcttaaagtggtcttttattgtccccagcacaaggtgcacctgtataatgataatgctgtttaatcagcttcttgatatgccacacctgttatgTGGATGGATCATctcggcaaaggagaaatgctcactaacagggatgtaaacaaatttgtgcacaagtTTTGAGAGAAATTAgatttgtgagtatggaacatttctgggatcttttatttcagttttacatgttgcatttatatttttgttcagtatatttaactTAAATAAATTATGTTTGGAAACCTGGTATTTACATATGGCTATAGCAGATTTCAGTTTGAGTATTTGGGGGGTTATATCGTGGTTTAGTTGTCAAATGTTTTACTGCAATTTATGGTAAGAAATTAGGGGTAACTTGACATTTTGCATATTTTCTATCAAATAATAGAACTACAGTGTACTCCTTTTGTACCTAATGCAATATGAATATAGGATCATATTTATTTTTGAATATAATTTGTTTCCATTCCTGACGACATTCCTGAGTGTAGGTTGTCATACAACTAAATAAACAACTACTGGTTTGGTTTTGTA

Function

symbol description
tmem101 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM101 (transmembrane protein 101).

NR:

description
transmembrane protein 101

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576260.2 True 2200 mRNA 0.43 4 26383505 26388284

Neighbor

gene id symbol gene type direction distance location
sgca LOC106589632 coding upstream 108524 26263059 ~ 26284385 (+)
LOC110499247 LOC106589631 coding upstream 147947 26230145 ~ 26235558 (+)
si:ch211-216b21.2 LOC106589629 coding upstream 332594 26003272 ~ 26050911 (+)
cdc42ep4b cdc42ep4 coding upstream 990913 25364815 ~ 25392592 (+)
sdk2b sdk2 coding upstream 1029080 24892930 ~ 25354425 (+)
g6pc3 g6pc3 coding downstream 16828 26405112 ~ 26407414 (+)
LOC110499256 LOC106589642 coding downstream 243811 26632095 ~ 26639269 (+)
LOC110499259 LOC106589644 coding downstream 266300 26654584 ~ 26656111 (+)
LOC110498782 LOC105021192 coding downstream 394826 26783110 ~ 26785166 (+)
si:zfos-1056e6.1 LOC105021192 coding downstream 406890 26795174 ~ 26802125 (+)
G1678925 NA non-coding upstream 8366 26373766 ~ 26375139 (+)
G1678889 NA non-coding upstream 49552 26333738 ~ 26333953 (+)
G1678881 NA non-coding upstream 61395 26321696 ~ 26322110 (+)
G1678867 NA non-coding upstream 82133 26301112 ~ 26301372 (+)
G1678820 NA non-coding upstream 85039 26295772 ~ 26298466 (+)
G1678910 NA non-coding downstream 679 26388963 ~ 26393373 (+)
G1679041 NA non-coding downstream 181149 26569433 ~ 26569746 (+)
G1679042 NA non-coding downstream 181535 26569819 ~ 26570088 (+)
G1679044 NA non-coding downstream 186064 26574348 ~ 26574588 (+)
G1679046 NA non-coding downstream 191149 26579433 ~ 26579713 (+)
G1677738 NA other upstream 741891 25636691 ~ 25641614 (+)
G1677419 LOC100194703 other upstream 1300228 25082664 ~ 25083277 (+)
faap100 faap100 other upstream 2802073 23576429 ~ 23582556 (+)
LOC110499192 LOC106589579 other upstream 3125436 23252800 ~ 23269058 (+)
LOC110513322 rsl1d1 other upstream 4423878 21936590 ~ 21959627 (+)
G1678963 NA other downstream 73910 26462194 ~ 26467953 (+)
G1679135 NA other downstream 312108 26700392 ~ 26775680 (+)
G1679823 NA other downstream 696142 27084426 ~ 27087463 (+)

Expression


Co-expression Network